SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Clostridium perfringens [TaxId: 1502]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2080656Superfamily c.1.5: Inosine monophosphate dehydrogenase (IMPDH) [51412] (2 families) (S)
    The phosphate moiety of substrate binds in the 'common' phosphate-binding site
  5. 2080703Family c.1.5.0: automated matches [227276] (1 protein)
    not a true family
  6. 2080704Protein automated matches [227084] (14 species)
    not a true protein
  7. 2287203Species Clostridium perfringens [TaxId:1502] [330504] (1 PDB entry)

PDB entry in Species: Clostridium perfringens [TaxId: 1502]:

More info for Species Clostridium perfringens [TaxId:1502] from c.1.5.0 automated matches

Timeline for Species Clostridium perfringens [TaxId:1502] from c.1.5.0 automated matches:

  • Species Clostridium perfringens [TaxId:1502] from c.1.5.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-03-02