SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Vibrio parahaemolyticus [TaxId: 223926]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2183409Fold d.90: FMN-dependent nitroreductase-like [55468] (1 superfamily)
    core: (alpha-beta-alpha-beta)2; 3 layers a/b/a; antiparallel beta-sheet: 1243
  4. 2183410Superfamily d.90.1: FMN-dependent nitroreductase-like [55469] (3 families) (S)
  5. 2183540Family d.90.1.0: automated matches [191446] (1 protein)
    not a true family
  6. 2183541Protein automated matches [190672] (25 species)
    not a true protein
  7. 2287201Species Vibrio parahaemolyticus [TaxId:223926] [330502] (1 PDB entry)

PDB entry in Species: Vibrio parahaemolyticus [TaxId: 223926]:

More info for Species Vibrio parahaemolyticus [TaxId:223926] from d.90.1.0 automated matches

Timeline for Species Vibrio parahaemolyticus [TaxId:223926] from d.90.1.0 automated matches:

  • Species Vibrio parahaemolyticus [TaxId:223926] from d.90.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-03-02