Lineage for d5iiel2 (5iie L:108-208)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2020524Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 protein domains)
  6. 2024392Protein automated matches [190374] (14 species)
    not a true protein
  7. 2024406Species Human (Homo sapiens) [TaxId:9606] [187221] (657 PDB entries)
  8. 2287080Domain d5iiel2: 5iie L:108-208 [330381]
    Other proteins in same PDB: d5iieb1, d5iiel1
    automated match to d1aqkl2

Details for d5iiel2

PDB Entry: 5iie (more details), 2.8 Å

PDB Description: structure of the unliganded anti-hiv antibody dh501 that binds gp120 v3 glycan and the base of v3
PDB Compounds: (L:) antibody DH501 light chain

SCOPe Domain Sequences for d5iiel2:

Sequence; same for both SEQRES and ATOM records: (download)

>d5iiel2 b.1.1.2 (L:108-208) automated matches {Human (Homo sapiens) [TaxId: 9606]}
qpkasptvtlfppsseelqankatlvclisdfypgvvkvawkadgsavnagvetttpskq
snnkyaassylsltsdqwkshksyscqvthegstvektvap

SCOPe Domain Coordinates for d5iiel2:

Click to download the PDB-style file with coordinates for d5iiel2.
(The format of our PDB-style files is described here.)

Timeline for d5iiel2:

  • d5iiel2 appears in periodic updates to SCOPe 2.06 starting on 2017-03-01

View in 3D
Domains from same chain:
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d5iiel1
View in 3D
Domains from other chains:
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d5iieb1