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Lineage for d5iieb1 (5iie B:3-106)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2026644Family b.1.1.0: automated matches [191470] (1 protein)
    not a true family
  6. 2026645Protein automated matches [190740] (27 species)
    not a true protein
  7. 2026747Species Human (Homo sapiens) [TaxId:9606] [187920] (847 PDB entries)
  8. 2287070Domain d5iieb1: 5iie B:3-106 [330371]
    Other proteins in same PDB: d5iiel2
    automated match to d1aqkl1

Details for d5iieb1

PDB Entry: 5iie (more details), 2.8 Å

PDB Description: structure of the unliganded anti-hiv antibody dh501 that binds gp120 v3 glycan and the base of v3
PDB Compounds: (B:) antibody DH501 light chain

SCOPe Domain Sequences for d5iieb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5iieb1 b.1.1.0 (B:3-106) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vltqppsvsgapgqrvtiscagtksnigdcsvswyqqlpgatprlliyqnnnrpsgvsdr
fsgsksgtsaslaitglqtedeadyfclsydtsfsgwrfgggtrltv

SCOPe Domain Coordinates for d5iieb1:

Click to download the PDB-style file with coordinates for d5iieb1.
(The format of our PDB-style files is described here.)

Timeline for d5iieb1:

  • d5iieb1 appears in periodic updates to SCOPe 2.06 starting on 2017-03-01