SCOPe 2.06: Domain d5jbsa_: 5jbs A:

Lineage for d5jbsa_ (5jbs A:)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.17: Cystatin-like [54402] (7 superfamilies)
   Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet

4. Superfamily d.17.4: NTF2-like [54427] (31 families)
   has a beta-alpha(2)-beta insertion after the main helix

5. Family d.17.4.26: VirB8-like [160029] (2 proteins)
   Pfam PF04335

6. Protein automated matches [190553] (2 species)
   not a true protein

7. Species Brucella suis [TaxId:204722] [330344] (1 PDB entry)

8. Domain d5jbsa_: 5jbs A: [330345]
   automated match to d2bhma1
   complexed with cl, epe, gol, peg

Details for d5jbsa_

PDB Entry: 5jbs, 1.95 Å

PDB Description: conformational changes during monomer-to-dimer transition of brucella suis virb8

PDB Compounds: (A:) type IV secretion system protein virb8

SCOPe Domain Sequences for d5jbsa_:

Sequence, based on SEQRES records:

>d5jbsa_ d.17.4.26 (A:) automated matches {Brucella suis [TaxId: 204722]}
sydtvrdkywlsqyviaretydwytlqkdyetvgmlsspsegqsyasqfqgdkaldkqyg
snvrtsvtivsivpngkgigtvrfakttkrtnetgdgetthwiatigyqyvnpslmsesa
rltnplgfnvtsyrvdpemgvv

Sequence, based on observed residues (ATOM records):

>d5jbsa_ d.17.4.26 (A:) automated matches {Brucella suis [TaxId: 204722]}
sydtvrdkywlsqyviaretydwytlqkdyetvgmlsspsegqsyasqfqgdkaldkqyg
snvrtsvtivsivpngkgigtvrfakttkrtgdgetthwiatigyqyvnpslmsesarlt
nplgfnvtsyrvdpemgvv

Timeline for d5jbsa_:

• d5jbsa_ is new in SCOPe 2.06-stable
  
• d5jbsa_ appears in SCOPe 2.07
  
• d5jbsa_ appears in the current release, SCOPe 2.08