SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Bacillus halodurans [TaxId: 272558]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1981147Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 1981148Superfamily a.4.1: Homeodomain-like [46689] (20 families) (S)
    consists only of helices
  5. 1982024Family a.4.1.0: automated matches [191447] (1 protein)
    not a true family
  6. 1982025Protein automated matches [190674] (22 species)
    not a true protein
  7. 2287027Species Bacillus halodurans [TaxId:272558] [330328] (2 PDB entries)

PDB entries in Species: Bacillus halodurans [TaxId: 272558]:

  1. Domain(s) for 5gp9:
    1. 2287055Domain d5gp9b1: 5gp9 B:8-78 [330356]
      Other proteins in same PDB: d5gp9a2, d5gp9b2
      automated match to d1vi0a1
      complexed with gol, mg, plm
    2. 2287082Domain d5gp9a1: 5gp9 A:3-78 [330383]
      Other proteins in same PDB: d5gp9a2, d5gp9b2
      automated match to d1vi0a1
      complexed with gol, mg, plm
  2. Domain(s) for 5gpa:
    1. 2287028Domain d5gpaa1: 5gpa A:3-78 [330329]
      Other proteins in same PDB: d5gpaa2, d5gpab2
      automated match to d1vi0a1
      complexed with gol, mg
    2. 2287032Domain d5gpab1: 5gpa B:8-78 [330333]
      Other proteins in same PDB: d5gpaa2, d5gpab2
      automated match to d1vi0a1
      complexed with gol, mg

More info for Species Bacillus halodurans [TaxId:272558] from a.4.1.0 automated matches

Timeline for Species Bacillus halodurans [TaxId:272558] from a.4.1.0 automated matches:

  • Species Bacillus halodurans [TaxId:272558] from a.4.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-03-01