SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Toxoplasma gondii [TaxId: 508771]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2078561Superfamily c.1.1: Triosephosphate isomerase (TIM) [51351] (2 families) (S)
  5. 2078925Family c.1.1.0: automated matches [191424] (1 protein)
    not a true family
  6. 2078926Protein automated matches [190605] (21 species)
    not a true protein
  7. 2286918Species Toxoplasma gondii [TaxId:508771] [330219] (1 PDB entry)

PDB entry in Species: Toxoplasma gondii [TaxId: 508771]:

More info for Species Toxoplasma gondii [TaxId:508771] from c.1.1.0 automated matches

Timeline for Species Toxoplasma gondii [TaxId:508771] from c.1.1.0 automated matches:

  • Species Toxoplasma gondii [TaxId:508771] from c.1.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-02-23