SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Volvox carteri [TaxId: 3068]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2156385Fold d.7: LysM domain [54105] (1 superfamily)
    beta-alpha(2)-beta; antiparallel strands
  4. 2156386Superfamily d.7.1: LysM domain [54106] (2 families) (S)
    automatically mapped to Pfam PF01476
  5. 2156395Family d.7.1.0: automated matches [234000] (1 protein)
    not a true family
  6. 2156396Protein automated matches [234001] (4 species)
    not a true protein
  7. 2286794Species Volvox carteri [TaxId:3068] [330095] (1 PDB entry)

PDB entry in Species: Volvox carteri [TaxId: 3068]:

More info for Species Volvox carteri [TaxId:3068] from d.7.1.0 automated matches

Timeline for Species Volvox carteri [TaxId:3068] from d.7.1.0 automated matches:

  • Species Volvox carteri [TaxId:3068] from d.7.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-02-23