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Lineage for d5if8a_ (5if8 A:)

  1. Root: SCOPe 2.06
  2. 2217451Class e: Multi-domain proteins (alpha and beta) [56572] (69 folds)
  3. 2223731Fold e.77: PA C-terminal domain-like [254112] (1 superfamily)
    Pfam PF00603; PubMed 18615018; complex fold with N-terminal a+b domain and C-terminal all-a domain
  4. 2223732Superfamily e.77.1: PA C-terminal domain-like [254132] (1 family) (S)
  5. 2223733Family e.77.1.1: PA C-terminal domain-like [254167] (2 protein domains)
  6. 2223737Protein automated matches [254658] (4 species)
    not a true protein
  7. 2286700Species Influenza a virus (strain a/wilson-smith/1933 h1n1) [TaxId:381518] [330001] (7 PDB entries)
  8. 2286719Domain d5if8a_: 5if8 A: [330020]
    automated match to d3cm8a_
    complexed with 6ax, cl, dms, edo, gol

Details for d5if8a_

PDB Entry: 5if8 (more details), 2.3 Å

PDB Description: crystal structure of polymerase acid protein (pa) from influenza a virus, wilson-smith/1933 (h1n1) bound to fragment hit ebsi-2643 5- [(4-chlorophenyl)methyl]-1,3,4-oxadiazol-2-amine
PDB Compounds: (A:) Polymerase acidic protein

SCOPe Domain Sequences for d5if8a_:

Sequence, based on SEQRES records: (download)

>d5if8a_ e.77.1.1 (A:) automated matches {Influenza a virus (strain a/wilson-smith/1933 h1n1) [TaxId: 381518]}
prplrlpdgppcsqrskfllmdalklsiedpshegegiplydaikcmrtffgwkepnvvk
phekginpnyllswkqvlaelqdieneekiprtknmkktsqlkwalgenmapekvdfddc
kdvgdlkqydsdepelrslaswiqnefnkaceltdsswieldeigedaapiehiasmrrn
yftaevshcrateyimkgvyintallnascaamddfqlipmiskcrtkegrrktnlygfi
ikgrshlrndtdvvnfvsmefsltdprlephkwekycvlevgdmllrsaighvsrpmfly
vrtngtskikmkwgmemrrcllqslqqiesmieaessvkekdmtkeffenksetwpvges
pkgveegsigkvcrtllaksvfnslyaspqlegfsaesrklllivqalrdnlepgtfdlg
glyeaieeclindpwvllnaswfnsflth

Sequence, based on observed residues (ATOM records): (download)

>d5if8a_ e.77.1.1 (A:) automated matches {Influenza a virus (strain a/wilson-smith/1933 h1n1) [TaxId: 381518]}
prplrlpdgppcsqrskfllmdalklsiedgiplydaikcmrtffgwkepnvvkphekgi
npnyllswkqvlaelqdieneekiprtknmkktsqlkwalgeelrslaswiqnefnkace
ltdsswieldeigedaapiehiasmrrnyftaevshcrateyimkgvyintallnascaa
mddfqlipmiskcrtkegrrktnlygfiikgrshlrndtdvvnfvsmefsltdprlephk
wekycvlevgdmllrsaighvsrpmflyvrtngtskikmkwgmemrrcllqslqqiesmi
eaessvkekdmtkeffenkspkgveegsigkvcrtllaksvfnslyaspqlegfsaesrk
lllivqalrdnlgglyeaieeclindpwvllnaswfnsflth

SCOPe Domain Coordinates for d5if8a_:

Click to download the PDB-style file with coordinates for d5if8a_.
(The format of our PDB-style files is described here.)

Timeline for d5if8a_:

  • d5if8a_ appears in periodic updates to SCOPe 2.06 starting on 2017-02-22