Lineage for d5ggya1 (5ggy A:55-319)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2143226Fold c.92: Chelatase-like [53799] (3 superfamilies)
    duplication: tandem repeat of two domains; 3 layers (a/b/a); parallel beta-sheet of 4 strands, order 2134
  4. 2143333Superfamily c.92.2: "Helical backbone" metal receptor [53807] (5 families) (S)
    contains a long alpha helical insertion in the interdomain linker
  5. 2143580Family c.92.2.0: automated matches [191548] (1 protein)
    not a true family
  6. 2143581Protein automated matches [190944] (35 species)
    not a true protein
  7. 2286706Species Vibrio cholerae [TaxId:345073] [330007] (2 PDB entries)
  8. 2286707Domain d5ggya1: 5ggy A:55-319 [330008]
    Other proteins in same PDB: d5ggya2, d5ggyn2
    automated match to d1efdn_
    complexed with cl

Details for d5ggya1

PDB Entry: 5ggy (more details), 2.5 Å

PDB Description: x-ray crystal structure of periplasmic desferal binding protein fhud from vibrio cholerae
PDB Compounds: (A:) Iron(III) ABC transporter, periplasmic iron-compound-binding protein

SCOPe Domain Sequences for d5ggya1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ggya1 c.92.2.0 (A:55-319) automated matches {Vibrio cholerae [TaxId: 345073]}
rvvvlnwdlleqvlelgiqpvgapelssyvqwvvqpevpssvqdigtrtepnlekiaalk
pdvilaagpqqdllatlgriapvvylpnfseqdnaaqvaishfktlatlfgkeavaqqkl
eamyarfselkaslqhafgdtlpavvtlrfanptsvflytenstpqyvleqlglssalpq
ppkewgivqkrlselqhveqgyvlyflpfaeekkvqksvlwrampfvqagrvnsvrpvws
yggamslrysaeaitesllavapqs

SCOPe Domain Coordinates for d5ggya1:

Click to download the PDB-style file with coordinates for d5ggya1.
(The format of our PDB-style files is described here.)

Timeline for d5ggya1:

  • d5ggya1 appears in periodic updates to SCOPe 2.06 starting on 2017-02-22

View in 3D
Domains from same chain:
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d5ggya2