SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5i4xa_ (5i4x A:)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2152584Fold d.2: Lysozyme-like [53954] (1 superfamily)
    common alpha+beta motif for the active site region
  4. 2152585Superfamily d.2.1: Lysozyme-like [53955] (12 families) (S)
  5. 2152623Family d.2.1.2: C-type lysozyme [53960] (3 protein domains)
    automatically mapped to Pfam PF00062
  6. 2152687Protein Lysozyme [53961] (14 species)
    ubiquitous in a variety of tissues and secretions
  7. 2152695Species Chicken (Gallus gallus) [TaxId:9031] [53962] (676 PDB entries)
    Uniprot P00698
  8. 2286508Domain d5i4xa_: 5i4x A: [329809]
    automated match to d3lzta_
    complexed with cl, ure

Details for d5i4xa_

PDB Entry: 5i4x (more details), 1.61 Å

PDB Description: exploring onset of lysozyme denaturation by urea - soak period 2 hours
PDB Compounds: (A:) Lysozyme C

SCOPe Domain Sequences for d5i4xa_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5i4xa_ d.2.1.2 (A:) Lysozyme {Chicken (Gallus gallus) [TaxId: 9031]}
kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
qawirgcrl

SCOPe Domain Coordinates for d5i4xa_:

Click to download the PDB-style file with coordinates for d5i4xa_.
(The format of our PDB-style files is described here.)

Timeline for d5i4xa_:

  • d5i4xa_ appears in periodic updates to SCOPe 2.06 starting on 2017-02-15