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Lineage for d5i07b_ (5i07 B:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2089551Superfamily c.1.20: tRNA-guanine transglycosylase [51713] (1 family) (S)
  5. 2089552Family c.1.20.1: tRNA-guanine transglycosylase [51714] (2 protein domains)
  6. 2089563Protein Queosine tRNA-guanine transglycosylase [51715] (3 species)
    contains zinc-binding subdomain
  7. 2089589Species Zymomonas mobilis [TaxId:542] [51716] (98 PDB entries)
    Uniprot P28720
  8. 2286504Domain d5i07b_: 5i07 B: [329805]
    automated match to d1q2ra_
    protein/RNA complex; complexed with edo, gol, ne8, zn

Details for d5i07b_

PDB Entry: 5i07 (more details), 1.89 Å

PDB Description: trna guanine transglycosylase (tgt) in co-crystallized complex with 6- amino-4-(2-phenylethyl)-1,7-dihydro-8h-imidazo[4,5-g]quinazolin-8-one
PDB Compounds: (B:) Queuine tRNA-ribosyltransferase

SCOPe Domain Sequences for d5i07b_:

Sequence, based on SEQRES records: (download)

>d5i07b_ c.1.20.1 (B:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
rprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilgn
tyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmslssltkqseegvtfkshldg
srhmlspersieiqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsrk
eqaenaalfgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvpm
lpddkphylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfsed
lkpldsechcavcqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegrf
sqfaqdfraryfarns

Sequence, based on observed residues (ATOM records): (download)

>d5i07b_ c.1.20.1 (B:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
rprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvratgadiilgntyhlmlrp
gaeriaklgglhsfmgwdrpiltdsggyqvmslssltkqseegvtfkshldgsrhmlspe
rsieiqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsrkeqaenaal
fgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvpmlpddkphy
lmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfsedlkpldsec
hcavcqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegrfsqfaqdfr
aryfarns

SCOPe Domain Coordinates for d5i07b_:

Click to download the PDB-style file with coordinates for d5i07b_.
(The format of our PDB-style files is described here.)

Timeline for d5i07b_:

  • d5i07b_ appears in periodic updates to SCOPe 2.06 starting on 2017-02-16