Lineage for d5imsb1 (5ims B:83-270)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2108258Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
  4. 2108259Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families) (S)
    there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
    two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules
  5. 2108260Family c.36.1.5: Pyruvate oxidase and decarboxylase Pyr module [88724] (8 protein domains)
    the N-terminal, Pyr module is separated from the C-terminal, PP module by an alpha/beta domain of Rossmann-like topology
    automatically mapped to Pfam PF02776
  6. 2108261Protein Acetohydroxyacid synthase catalytic subunit [88733] (3 species)
  7. 2270801Species Saccharomyces cerevisiae [TaxId:559292] [314106] (2 PDB entries)
  8. 2286498Domain d5imsb1: 5ims B:83-270 [329799]
    Other proteins in same PDB: d5imsa2, d5imsb2
    automated match to d1n0ha2
    complexed with act, fad, k, mg, oxy, po4, tpp

Details for d5imsb1

PDB Entry: 5ims (more details), 1.98 Å

PDB Description: saccharomyces cerevisiae acetohydroxyacid synthase
PDB Compounds: (B:) Acetolactate synthase catalytic subunit, mitochondrial

SCOPe Domain Sequences for d5imsb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5imsb1 c.36.1.5 (B:83-270) Acetohydroxyacid synthase catalytic subunit {Saccharomyces cerevisiae [TaxId: 559292]}
pdmdtsfvgltggqifnemmsrqnvdtvfgypggailpvydaihnsdkfnfvlpkheqga
ghmaegyarasgkpgvvlvtsgpgatnvvtpmadafadgipmvvftgqvptsaigtdafq
eadvvgisrsctkwnvmvksveelplrineafeiatsgrpgpvlvdlpkdvtaailrnpi
ptkttlps

SCOPe Domain Coordinates for d5imsb1:

Click to download the PDB-style file with coordinates for d5imsb1.
(The format of our PDB-style files is described here.)

Timeline for d5imsb1:

  • d5imsb1 appears in periodic updates to SCOPe 2.06 starting on 2017-02-16

View in 3D
Domains from same chain:
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d5imsb2