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Lineage for d5i5ga2 (5i5g A:335-531)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2108258Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
  4. 2108259Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families) (S)
    there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
    two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules
  5. 2108851Family c.36.1.0: automated matches [227300] (1 protein)
    not a true family
  6. 2108852Protein automated matches [227126] (18 species)
    not a true protein
  7. 2285547Species Scheffersomyces stipitis [TaxId:322104] [328848] (7 PDB entries)
  8. 2286473Domain d5i5ga2: 5i5g A:335-531 [329774]
    Other proteins in same PDB: d5i5ga3
    automated match to d1gpua2
    complexed with peg, pop; mutant

Details for d5i5ga2

PDB Entry: 5i5g (more details), 1.95 Å

PDB Description: crystal structure of transketolase mutant-r525l from pichia stipitis
PDB Compounds: (A:) transketolase

SCOPe Domain Sequences for d5i5ga2:

Sequence; same for both SEQRES and ATOM records: (download)

>d5i5ga2 c.36.1.0 (A:335-531) automated matches {Scheffersomyces stipitis [TaxId: 322104]}
lpenwdkalpvytpadaavatrklseivlskiipevpeiiggsadltpsnltkakgtvdf
qpaatglgdysgryirygvrehamgaimngiaafganyknyggtflnfvsyaagavrlsa
lsefpitwvathdsiglgedgpthqpietlahfratpnisvwrpadgnetsaayksaies
thtphilaltlqnlpql

SCOPe Domain Coordinates for d5i5ga2:

Click to download the PDB-style file with coordinates for d5i5ga2.
(The format of our PDB-style files is described here.)

Timeline for d5i5ga2:

  • d5i5ga2 appears in periodic updates to SCOPe 2.06 starting on 2017-02-15