Lineage for d5i09a_ (5i09 A:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2089551Superfamily c.1.20: tRNA-guanine transglycosylase [51713] (1 family) (S)
  5. 2089552Family c.1.20.1: tRNA-guanine transglycosylase [51714] (2 protein domains)
  6. 2089563Protein Queosine tRNA-guanine transglycosylase [51715] (3 species)
    contains zinc-binding subdomain
  7. 2089589Species Zymomonas mobilis [TaxId:542] [51716] (113 PDB entries)
    Uniprot P28720
  8. 2286439Domain d5i09a_: 5i09 A: [329740]
    automated match to d1q2ra_
    protein/RNA complex; complexed with 1ud, gol, zn

Details for d5i09a_

PDB Entry: 5i09 (more details), 1.44 Å

PDB Description: trna guanine transglycosylase (tgt) in soaked complex with furanoside- based lin-benzoguanine 3
PDB Compounds: (A:) Queuine tRNA-ribosyltransferase

SCOPe Domain Sequences for d5i09a_:

Sequence, based on SEQRES records: (download)

>d5i09a_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
drprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilg
ntyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmslssltkqseegvtfkshld
gsrhmlspersieiqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsr
keqaenaalfgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvp
mlpddkphylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfse
dlkpldsechcavcqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegr
fsqfaqdfraryfa

Sequence, based on observed residues (ATOM records): (download)

>d5i09a_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
drprfsfsiaaregkartgtiemkrgvirtpafmpvgaatvkalkpetvratgadiilgn
tyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmslstkqseegvtfksrhmlsp
ersieiqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsrkeqaenaa
lfgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvpmlpddkph
ylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfsedlkpldse
chcavcqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegrfsqfaqdf
raryfa

SCOPe Domain Coordinates for d5i09a_:

Click to download the PDB-style file with coordinates for d5i09a_.
(The format of our PDB-style files is described here.)

Timeline for d5i09a_:

  • d5i09a_ appears in periodic updates to SCOPe 2.06 starting on 2017-02-15