Lineage for d5m1ab1 (5m1a B:27-138)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2161468Fold d.17: Cystatin-like [54402] (7 superfamilies)
    Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet
  4. 2161993Superfamily d.17.4: NTF2-like [54427] (31 families) (S)
    has a beta-alpha(2)-beta insertion after the main helix
  5. 2162394Family d.17.4.5: Penicillin binding protein 2a (PBP2A), N-terminal domain [82595] (1 protein)
    some sequence similarity to KSI
    automatically mapped to Pfam PF05223
  6. 2162395Protein Penicillin binding protein 2a (PBP2A), N-terminal domain [82596] (1 species)
  7. 2162396Species Staphylococcus aureus [TaxId:1280] [82597] (10 PDB entries)
    Uniprot O54286 27-668
  8. 2286272Domain d5m1ab1: 5m1a B:27-138 [329573]
    Other proteins in same PDB: d5m1aa2, d5m1aa3, d5m1ab2, d5m1ab3
    automated match to d1vqqa1
    complexed with cd, mur

Details for d5m1ab1

PDB Entry: 5m1a (more details), 2 Å

PDB Description: crystal structure of pbp2a from mrsa in the presence of ceftazidime ligand
PDB Compounds: (B:) Penicillin-binding protein 2

SCOPe Domain Sequences for d5m1ab1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5m1ab1 d.17.4.5 (B:27-138) Penicillin binding protein 2a (PBP2A), N-terminal domain {Staphylococcus aureus [TaxId: 1280]}
dkeinntidaiedknfkqvykdssyisksdngevemterpikiynslgvkdiniqdrkik
kvsknkkrvdaqykiktnygnidrnvqfnfvkedgmwkldwdhsviipgmqk

SCOPe Domain Coordinates for d5m1ab1:

Click to download the PDB-style file with coordinates for d5m1ab1.
(The format of our PDB-style files is described here.)

Timeline for d5m1ab1:

  • d5m1ab1 appears in periodic updates to SCOPe 2.06 starting on 2017-02-09