Lineage for d5t4va_ (5t4v A:)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1992366Fold a.29: Bromodomain-like [47363] (15 superfamilies)
    4 helices; bundle; minor mirror variant of up-and-down topology
  4. 1992367Superfamily a.29.2: Bromodomain [47370] (2 families) (S)
  5. 1992467Family a.29.2.0: automated matches [191428] (1 protein)
    not a true family
  6. 1992468Protein automated matches [190615] (10 species)
    not a true protein
  7. 1992472Species Human (Homo sapiens) [TaxId:9606] [187641] (639 PDB entries)
  8. 2286227Domain d5t4va_: 5t4v A: [329528]
    automated match to d4lc2a_
    complexed with edo, fmt, n48

Details for d5t4va_

PDB Entry: 5t4v (more details), 1.65 Å

PDB Description: crystal structure of the bromodomain of human brpf1 in complex with ni-48 ligand
PDB Compounds: (A:) Peregrin

SCOPe Domain Sequences for d5t4va_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5t4va_ a.29.2.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
mqltpflillrktleqlqekdtgnifsepvplsevpdyldhikkpmdfftmkqnleayry
lnfddfeedfnlivsnclkynakdtifyraavrlreqggavlrqarrqaekm

SCOPe Domain Coordinates for d5t4va_:

Click to download the PDB-style file with coordinates for d5t4va_.
(The format of our PDB-style files is described here.)

Timeline for d5t4va_:

  • d5t4va_ appears in periodic updates to SCOPe 2.06 starting on 2017-02-09