Lineage for d5b5ef_ (5b5e F:)

  1. Root: SCOPe 2.06
  2. 2223823Class f: Membrane and cell surface proteins and peptides [56835] (59 folds)
  3. 2226297Fold f.23: Single transmembrane helix [81407] (42 superfamilies)
    not a true fold
  4. 2227446Superfamily f.23.38: Cytochrome b559 subunits [161045] (1 family) (S)
  5. 2227447Family f.23.38.1: Cytochrome b559 subunits [161046] (3 protein domains)
    Pfam PF00283 comprises PsbF beta subunit (PsbF) and the transmembrane helix of alpha subunit (PsbE) that bind one heme group between them; the lumenal region of the alpha subunit is covered by Pfam PF00284
  6. 2227467Protein automated matches [191000] (4 species)
    not a true protein
  7. 2227473Species Thermosynechococcus vulcanus [TaxId:32053] [189914] (9 PDB entries)
  8. 2286097Domain d5b5ef_: 5b5e F: [329398]
    Other proteins in same PDB: d5b5ea_, d5b5eh_, d5b5ei_, d5b5ej_, d5b5el_, d5b5ev_, d5b5ex_, d5b5ez_
    automated match to d2axtf1
    complexed with bcr, bct, ca, cl, cla, dgd, dms, fe2, hem, htg, lhg, lmg, lmt, mg, oex, pho, pl9, rrx, sqd, unl

Details for d5b5ef_

PDB Entry: 5b5e (more details), 1.87 Å

PDB Description: crystal structure analysis of photosystem ii complex
PDB Compounds: (F:) Cytochrome b559 subunit beta

SCOPe Domain Sequences for d5b5ef_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5b5ef_ f.23.38.1 (F:) automated matches {Thermosynechococcus vulcanus [TaxId: 32053]}
vsypiftvrwvavhtlavptifflgaiaamqfiqr

SCOPe Domain Coordinates for d5b5ef_:

Click to download the PDB-style file with coordinates for d5b5ef_.
(The format of our PDB-style files is described here.)

Timeline for d5b5ef_:

  • d5b5ef_ appears in periodic updates to SCOPe 2.06 starting on 2017-02-03