SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5mx3b1 (5mx3 B:1-112)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2026644Family b.1.1.0: automated matches [191470] (1 protein)
    not a true family
  6. 2026645Protein automated matches [190740] (25 species)
    not a true protein
  7. 2028399Species Mouse (Mus musculus) [TaxId:10090] [188198] (535 PDB entries)
  8. 2285988Domain d5mx3b1: 5mx3 B:1-112 [329289]
    Other proteins in same PDB: d5mx3b2, d5mx3l2
    automated match to d4oz4b1

Details for d5mx3b1

PDB Entry: 5mx3 (more details), 2.98 Å

PDB Description: structure of dc8e8 fab crystallized at ph 8.5
PDB Compounds: (B:) antibody kappa chain

SCOPe Domain Sequences for d5mx3b1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5mx3b1 b.1.1.0 (B:1-112) automated matches {Mus musculus [TaxId: 10090]}
divmsqspsslavsagekvtmsckssqsllnsrtrknylawyqqkpgqspklliywastr
esgvpdrftgsgsgtdftltissvqaedlavyyckqsfylrtfgggtkldik

SCOPe Domain Coordinates for d5mx3b1:

Click to download the PDB-style file with coordinates for d5mx3b1.
(The format of our PDB-style files is described here.)

Timeline for d5mx3b1:

  • d5mx3b1 appears in periodic updates to SCOPe 2.06 starting on 2017-02-02

View in 3D
Domains from same chain:
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d5mx3b2