SCOPe 2.08: Domain d5i3dd_: 5i3d D:

Lineage for d5i3dd_ (5i3d D:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.4: Family 1 of glycosyl hydrolase [51521] (6 proteins)

6. Protein automated matches [190245] (12 species)
   not a true protein

7. Species Sulfolobus solfataricus [TaxId:273057] [195161] (4 PDB entries)

8. Domain d5i3dd_: 5i3d D: [329255]
   automated match to d4eama_
   complexed with act, pe8; mutant

Details for d5i3dd_

PDB Entry: 5i3d, 2.16 Å

PDB Description: sulfolobus solfataricus beta-glycosidase - e387y mutant

PDB Compounds: (D:) beta-galactosidase

SCOPe Domain Sequences for d5i3dd_:

Sequence, based on SEQRES records:

>d5i3dd_ c.1.8.4 (D:) automated matches {Sulfolobus solfataricus [TaxId: 273057]}
sfpnsfrfgwsqagfqsemgtpgsedpntdwykwvhdpenmaaglvsgdlpengpgywgn
yktfhdnaqkmglkiarlnvewsrifpnplprpqnfdeskqdvteveinenelkrldeya
nkdalnhyreifkdlksrglyfilnmyhwplplwlhdpirvrrgdftgpsgwlstrtvye
farfsayiawkfddlvdeystmnepnvvgglgyvgvksgfppgylsfelsrramyniiqa
haraydgiksvskkpvgiiyanssfqpltdkdmeavemaendnrwwffdaiirgeitrgn
ekivrddlkgrldwigvnyytrtvvkrtekgyvslggyghgcernsvslaglptsdfgwe
ffpeglydvltkywnryhlymyvtyngiaddadyqrpyylvshvyqvhrainsgadvrgy
lhwsladnyewasgfsmrfgllkvdyntkrlywrpsalvyreiatngaitdeiehlnsvp
pvkplrh

Sequence, based on observed residues (ATOM records):

>d5i3dd_ c.1.8.4 (D:) automated matches {Sulfolobus solfataricus [TaxId: 273057]}
sfpnsfrfgwsqagfqsemgtpgsedpntdwykwvhdpenmaaglvsgdlpengpgywgn
yktfhdnaqkmglkiarlnvewsrifpnplpdvteveinenelkrldeyankdalnhyre
ifkdlksrglyfilnmyhwplplwlhdpirvrrgdftgpsgwlstrtvyefarfsayiaw
kfddlvdeystmnepnvvgglgyvgvksgfppgylsfelsrramyniiqaharaydgiks
vskkpvgiiyanssfqpltdkdmeavemaendnrwwffdaiirgeitrgnekivrddlkg
rldwigvnyytrtvvkrtekgyvslggyghgcernsvslaglptsdfgweffpeglydvl
tkywnryhlymyvtyngiaddadyqrpyylvshvyqvhrainsgadvrgylhwsladnye
wasgfsmrfgllkvdyntkrlywrpsalvyreiatngaitdeiehlnsvppvkplrh

Timeline for d5i3dd_:

• d5i3dd_ first appeared in SCOPe 2.06
  
• d5i3dd_ appears in SCOPe 2.07