Lineage for d5ugym1 (5ugy M:2-108)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2026644Family b.1.1.0: automated matches [191470] (1 protein)
    not a true family
  6. 2026645Protein automated matches [190740] (27 species)
    not a true protein
  7. 2026747Species Human (Homo sapiens) [TaxId:9606] [187920] (877 PDB entries)
  8. 2285827Domain d5ugym1: 5ugy M:2-108 [329128]
    Other proteins in same PDB: d5ugya1, d5ugya2, d5ugyb_, d5ugyc1, d5ugyc2, d5ugyd_, d5ugye1, d5ugye2, d5ugyf_
    automated match to d3sm5l1
    complexed with bma, nag

Details for d5ugym1

PDB Entry: 5ugy (more details), 2.8 Å

PDB Description: influenza hemagglutinin in complex with a neutralizing antibody
PDB Compounds: (M:) CH65 light chain

SCOPe Domain Sequences for d5ugym1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ugym1 b.1.1.0 (M:2-108) automated matches {Human (Homo sapiens) [TaxId: 9606]}
svltqppsvsvapgqtaritcggndigrksvhwnqqkpgqapvlvvcydsdrpsgiperf
sgsnsgntatltisrveagdeadyycqvwdsssdhvifgggtkltvl

SCOPe Domain Coordinates for d5ugym1:

Click to download the PDB-style file with coordinates for d5ugym1.
(The format of our PDB-style files is described here.)

Timeline for d5ugym1:

  • d5ugym1 appears in periodic updates to SCOPe 2.06 starting on 2017-01-26