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Lineage for d5hqmb2 (5hqm B:139-454)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2088460Superfamily c.1.14: RuBisCo, C-terminal domain [51649] (2 families) (S)
    automatically mapped to Pfam PF00016
  5. 2088461Family c.1.14.1: RuBisCo, large subunit, C-terminal domain [51650] (2 protein domains)
    N-terminal domain is alpha+beta
  6. 2088660Protein automated matches [226984] (8 species)
    not a true protein
  7. 2285613Species Rhodospirillum rubrum [TaxId:1085] [328914] (1 PDB entry)
  8. 2285756Domain d5hqmb2: 5hqm B:139-454 [329057]
    Other proteins in same PDB: d5hqma1, d5hqmb1
    automated match to d4lf2a2
    complexed with cap, k, mg

Details for d5hqmb2

PDB Entry: 5hqm (more details), 1.95 Å

PDB Description: structure function studies of r. palustris rubisco (r. palustris/r. rubrum chimera)
PDB Compounds: (B:) Ribulose bisphosphate carboxylase (R. palustris/R. rubrum chimera),Ribulose bisphosphate carboxylase

SCOPe Domain Sequences for d5hqmb2:

Sequence; same for both SEQRES and ATOM records: (download)

>d5hqmb2 c.1.14.1 (B:139-454) automated matches {Rhodospirillum rubrum [TaxId: 1085]}
gpsttikdlwrvlgrpvinggfivgtiikpklglrpqpfanacydfwlggdfikndepqg
nqvfapfkdtvravadamrraqdktgeaklfsfnitaddhyemlargefiletfadnadh
iaflvdgyvagpaavttarrafpkqylhyhraghgavtspqskrgytafvlskmarlqga
sgihtgtmgfgkmegeaadraiaymitedaadgpyfhqewlgmnpttpiisggmnalrmp
gffdnlghsnlimtagggafghvdggaagakslrqaeqcwkqgadpvefakdhrefaraf
esfpqdadklypnwra

SCOPe Domain Coordinates for d5hqmb2:

Click to download the PDB-style file with coordinates for d5hqmb2.
(The format of our PDB-style files is described here.)

Timeline for d5hqmb2:

  • d5hqmb2 appears in periodic updates to SCOPe 2.06 starting on 2017-01-26

View in 3D
Domains from same chain:
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d5hqmb1