SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Citrobacter rodentium [TaxId: 97825]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2130990Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
    main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
  4. 2130991Superfamily c.67.1: PLP-dependent transferases [53383] (10 families) (S)
  5. 2131690Family c.67.1.4: GABA-aminotransferase-like [53417] (17 protein domains)
    formerly omega-Aminoacid:pyruvate aminotransferase-like
  6. 2131998Protein automated matches [190152] (21 species)
    not a true protein
  7. 2285741Species Citrobacter rodentium [TaxId:97825] [329042] (1 PDB entry)

PDB entry in Species: Citrobacter rodentium [TaxId: 97825]:

More info for Species Citrobacter rodentium [TaxId:97825] from c.67.1.4 automated matches

Timeline for Species Citrobacter rodentium [TaxId:97825] from c.67.1.4 automated matches:

  • Species Citrobacter rodentium [TaxId:97825] from c.67.1.4 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-01-26