SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Naegleria fowleri [TaxId: 5763]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2172288Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2173863Superfamily d.58.6: Nucleoside diphosphate kinase, NDK [54919] (2 families) (S)
  5. 2174362Family d.58.6.0: automated matches [191597] (1 protein)
    not a true family
  6. 2174363Protein automated matches [191087] (11 species)
    not a true protein
  7. 2285735Species Naegleria fowleri [TaxId:5763] [329036] (1 PDB entry)

PDB entry in Species: Naegleria fowleri [TaxId: 5763]:

More info for Species Naegleria fowleri [TaxId:5763] from d.58.6.0 automated matches

Timeline for Species Naegleria fowleri [TaxId:5763] from d.58.6.0 automated matches:

  • Species Naegleria fowleri [TaxId:5763] from d.58.6.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-01-26