Lineage for d5mn9b_ (5mn9 B:)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2158219Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2158220Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2158221Family d.15.1.1: Ubiquitin-related [54237] (39 protein domains)
    Pfam PF00240
  6. 2158454Protein Ubiquitin [54238] (8 species)
  7. 2158468Species Cow (Bos taurus) [TaxId:9913] [224919] (34 PDB entries)
  8. 2285732Domain d5mn9b_: 5mn9 B: [329033]
    automated match to d1ogwa_

Details for d5mn9b_

PDB Entry: 5mn9 (more details), 2.05 Å

PDB Description: crystal structure of mindy-1 tmiu in complex with k48-diub
PDB Compounds: (B:) Ubiquitin-40S ribosomal protein S27a

SCOPe Domain Sequences for d5mn9b_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5mn9b_ d.15.1.1 (B:) Ubiquitin {Cow (Bos taurus) [TaxId: 9913]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

SCOPe Domain Coordinates for d5mn9b_:

Click to download the PDB-style file with coordinates for d5mn9b_.
(The format of our PDB-style files is described here.)

Timeline for d5mn9b_:

  • d5mn9b_ appears in periodic updates to SCOPe 2.06 starting on 2017-01-26

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d5mn9a_