SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Rhodospirillum rubrum [TaxId: 1085]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2088460Superfamily c.1.14: RuBisCo, C-terminal domain [51649] (2 families) (S)
    automatically mapped to Pfam PF00016
  5. 2088461Family c.1.14.1: RuBisCo, large subunit, C-terminal domain [51650] (2 protein domains)
    N-terminal domain is alpha+beta
  6. 2088660Protein automated matches [226984] (9 species)
    not a true protein
  7. 2285613Species Rhodospirillum rubrum [TaxId:1085] [328914] (1 PDB entry)

PDB entry in Species: Rhodospirillum rubrum [TaxId: 1085]:

More info for Species Rhodospirillum rubrum [TaxId:1085] from c.1.14.1 automated matches

Timeline for Species Rhodospirillum rubrum [TaxId:1085] from c.1.14.1 automated matches:

  • Species Rhodospirillum rubrum [TaxId:1085] from c.1.14.1 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-01-26