Lineage for d5j58b1 (5j58 B:237-606)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2105373Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
    core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145
  4. 2105374Superfamily c.26.1: Nucleotidylyl transferase [52374] (6 families) (S)
  5. 2106026Family c.26.1.0: automated matches [191377] (1 protein)
    not a true family
  6. 2106027Protein automated matches [190459] (47 species)
    not a true protein
  7. 2106228Species Trypanosoma brucei [TaxId:999953] [226467] (26 PDB entries)
  8. 2285604Domain d5j58b1: 5j58 B:237-606 [328905]
    Other proteins in same PDB: d5j58a2, d5j58b2, d5j58b3
    automated match to d4eg8b1
    protein/RNA complex; complexed with dms, gol, met, n56

Details for d5j58b1

PDB Entry: 5j58 (more details), 2.8 Å

PDB Description: trypanosoma brucei methionyl-trna synthetase in complex with inhibitor (chem 1856)
PDB Compounds: (B:) Methionyl-tRNA synthetase, putative

SCOPe Domain Sequences for d5j58b1:

Sequence, based on SEQRES records: (download)

>d5j58b1 c.26.1.0 (B:237-606) automated matches {Trypanosoma brucei [TaxId: 999953]}
kvekvffvtspiyyvnaaphighvystlitdvigryhrvkgervfaltgtdehgqkvaea
akqkqvspydfttavagefkkcfeqmdysidyfirttneqhkavvkelwtkleqkgdiyl
gryegwysisdesfltpqnitdgvdkdgnpckvslesghvvtwvseenymfrlsafrerl
lewyhanpgcivpefrrreviravekglpdlsvsraratlhnwaipvpgnpdhcvyvwld
altnyltgsrlrvdesgkevslvddfnelerfpadvhvigkdilkfhaiywpafllsagl
plpkkivahgwwtkdrkkiskslgnvfdpvekaeefgydalkyfllresgfsddgdysdk
nmiarlngel

Sequence, based on observed residues (ATOM records): (download)

>d5j58b1 c.26.1.0 (B:237-606) automated matches {Trypanosoma brucei [TaxId: 999953]}
kvekvffvtspiyyvnaaphighvystlitdvigryhrvkgervfaltgtdehgqkvaea
akqkqvspydfttavagefkkcfeqmdysidyfirttneqhkavvkelwtkleqkgdiyl
gryegwysisdesfltpqnitdgnpckvslesghvvtwvseenymfrlsafrerllewyh
anpgcivpefrrreviravekglpdlsvsraratlhnwaipvpgnpdhcvyvwldaltny
ltgsrlrvdesgkevslvddfnelerfpadvhvigkdilkfhaiywpafllsaglplpkk
ivahgwwtkdrkkiskslgnvfdpvekaeefgydalkyfllresgfsddgdysdknmiar
lngel

SCOPe Domain Coordinates for d5j58b1:

Click to download the PDB-style file with coordinates for d5j58b1.
(The format of our PDB-style files is described here.)

Timeline for d5j58b1:

  • d5j58b1 appears in periodic updates to SCOPe 2.06 starting on 2017-01-26