SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Porcine epidemic diarrhea virus cv777 [TaxId: 229032]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2077691Fold b.140: Replicase NSP9 [101815] (1 superfamily)
    barrel; n=6, S=8, greek-key; similar to one trypsin-like protease barrel
  4. 2077692Superfamily b.140.1: Replicase NSP9 [101816] (2 families) (S)
  5. 2077705Family b.140.1.0: automated matches [191526] (1 protein)
    not a true family
  6. 2077706Protein automated matches [190886] (3 species)
    not a true protein
  7. 2285579Species Porcine epidemic diarrhea virus cv777 [TaxId:229032] [328880] (2 PDB entries)

PDB entries in Species: Porcine epidemic diarrhea virus cv777 [TaxId: 229032]:

  1. Domain(s) for 5hiy:
    1. 2285630Domain d5hiyb_: 5hiy B: [328931]
      automated match to d1qz8a_
      mutant
    2. 2285643Domain d5hiya_: 5hiy A: [328944]
      automated match to d1qz8a_
      mutant
    3. 2285656Domain d5hiyc_: 5hiy C: [328957]
      automated match to d1qz8a_
      mutant
  2. Domain(s) for 5hiz:
    1. 2285580Domain d5hizb_: 5hiz B: [328881]
      automated match to d1qz8a_
    2. 2285649Domain d5hiza_: 5hiz A: [328950]
      automated match to d1qz8a_

More info for Species Porcine epidemic diarrhea virus cv777 [TaxId:229032] from b.140.1.0 automated matches

Timeline for Species Porcine epidemic diarrhea virus cv777 [TaxId:229032] from b.140.1.0 automated matches:

  • Species Porcine epidemic diarrhea virus cv777 [TaxId:229032] from b.140.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-01-25