Lineage for Species: Scheffersomyces stipitis [TaxId: 322104]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2108258Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
  4. 2108259Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families) (S)
    there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
    two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules
  5. 2108851Family c.36.1.0: automated matches [227300] (1 protein)
    not a true family
  6. 2108852Protein automated matches [227126] (20 species)
    not a true protein
  7. 2285547Species Scheffersomyces stipitis [TaxId:322104] [328848] (7 PDB entries)

PDB entries in Species: Scheffersomyces stipitis [TaxId: 322104]:

  1. Domain(s) for 5hgx:
    1. 2285576Domain d5hgxa1: 5hgx A:2-334 [328877]
      Other proteins in same PDB: d5hgxa3
      automated match to d1ay0a1
      complexed with 1pe; mutant
    2. 2285577Domain d5hgxa2: 5hgx A:335-531 [328878]
      Other proteins in same PDB: d5hgxa3
      automated match to d1gpua2
      complexed with 1pe; mutant
  2. Domain(s) for 5hje:
    1. 2285548Domain d5hjea1: 5hje A:2-334 [328849]
      Other proteins in same PDB: d5hjea3
      automated match to d1ay0a1
      complexed with ca, i22, tpp
    2. 2285549Domain d5hjea2: 5hje A:335-531 [328850]
      Other proteins in same PDB: d5hjea3
      automated match to d1gpua2
      complexed with ca, i22, tpp
  3. Domain(s) for 5hyv:
    1. 2286249Domain d5hyva1: 5hyv A:2-334 [329550]
      Other proteins in same PDB: d5hyva3
      automated match to d1ay0a1
      complexed with 1pe, ca, tpp
    2. 2286250Domain d5hyva2: 5hyv A:335-531 [329551]
      Other proteins in same PDB: d5hyva3
      automated match to d1gpua2
      complexed with 1pe, ca, tpp
  4. Domain(s) for 5i4i:
    1. 2286624Domain d5i4ia1: 5i4i A:2-334 [329925]
      Other proteins in same PDB: d5i4ia3
      automated match to d1ay0a1
    2. 2286625Domain d5i4ia2: 5i4i A:335-531 [329926]
      Other proteins in same PDB: d5i4ia3
      automated match to d1gpua2
  5. Domain(s) for 5i51:
    1. 2286450Domain d5i51a1: 5i51 A:2-334 [329751]
      Other proteins in same PDB: d5i51a3
      automated match to d1ay0a1
      complexed with ca, f6r, peg, tpp; mutant
    2. 2286451Domain d5i51a2: 5i51 A:335-531 [329752]
      Other proteins in same PDB: d5i51a3
      automated match to d1gpua2
      complexed with ca, f6r, peg, tpp; mutant
  6. Domain(s) for 5i5e:
    1. 2286657Domain d5i5ea1: 5i5e A:2-334 [329958]
      Other proteins in same PDB: d5i5ea3
      automated match to d1ay0a1
      complexed with 5sp, ca, tpp; mutant
    2. 2286658Domain d5i5ea2: 5i5e A:335-531 [329959]
      Other proteins in same PDB: d5i5ea3
      automated match to d1gpua2
      complexed with 5sp, ca, tpp; mutant
  7. Domain(s) for 5i5g:
    1. 2286472Domain d5i5ga1: 5i5g A:2-334 [329773]
      Other proteins in same PDB: d5i5ga3
      automated match to d1ay0a1
      complexed with peg, pop; mutant
    2. 2286473Domain d5i5ga2: 5i5g A:335-531 [329774]
      Other proteins in same PDB: d5i5ga3
      automated match to d1gpua2
      complexed with peg, pop; mutant

More info for Species Scheffersomyces stipitis [TaxId:322104] from c.36.1.0 automated matches

Timeline for Species Scheffersomyces stipitis [TaxId:322104] from c.36.1.0 automated matches:

  • Species Scheffersomyces stipitis [TaxId:322104] from c.36.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-01-25