SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Nostoc punctiforme [TaxId: 272131]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1988413Fold a.25: Ferritin-like [47239] (6 superfamilies)
    core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
  4. 1988414Superfamily a.25.1: Ferritin-like [47240] (10 families) (S)
    contains bimetal-ion centre in the middle of the bundle
  5. 1990537Family a.25.1.0: automated matches [191307] (1 protein)
    not a true family
  6. 1990538Protein automated matches [190036] (37 species)
    not a true protein
  7. 2285537Species Nostoc punctiforme [TaxId:272131] [328838] (3 PDB entries)

PDB entries in Species: Nostoc punctiforme [TaxId: 272131]:

  1. Domain(s) for 5hjf:
    1. 2285541Domain d5hjfd1: 5hjf D:1-182 [328842]
      Other proteins in same PDB: d5hjfd2
      automated match to d4cyba_
    2. 2285545Domain d5hjfa_: 5hjf A: [328846]
      Other proteins in same PDB: d5hjfd2
      automated match to d4cyba_
    3. 2285625Domain d5hjfc_: 5hjf C: [328926]
      Other proteins in same PDB: d5hjfd2
      automated match to d4cyba_
    4. 2285645Domain d5hjfb_: 5hjf B: [328946]
      Other proteins in same PDB: d5hjfd2
      automated match to d4cyba_
  2. Domain(s) for 5hjh:
    1. 2285538Domain d5hjhd_: 5hjh D: [328839]
      automated match to d4cybj_
      complexed with epe, fe
    2. 2285544Domain d5hjhc_: 5hjh C: [328845]
      automated match to d4cybj_
      complexed with epe, fe
    3. 2285546Domain d5hjha_: 5hjh A: [328847]
      automated match to d4cybj_
      complexed with epe, fe
    4. 2285624Domain d5hjhb_: 5hjh B: [328925]
      automated match to d4cybj_
      complexed with epe, fe
  3. Domain(s) for 5i4j:
    1. 2285914Domain d5i4jc_: 5i4j C: [329215]
      automated match to d4cybd_
      complexed with epe, zn
    2. 2285924Domain d5i4ja_: 5i4j A: [329225]
      automated match to d4cybd_
      complexed with epe, zn
    3. 2285935Domain d5i4jd_: 5i4j D: [329236]
      automated match to d4cybd_
      complexed with epe, zn
    4. 2285953Domain d5i4jb_: 5i4j B: [329254]
      automated match to d4cybd_
      complexed with epe, zn

More info for Species Nostoc punctiforme [TaxId:272131] from a.25.1.0 automated matches

Timeline for Species Nostoc punctiforme [TaxId:272131] from a.25.1.0 automated matches:

  • Species Nostoc punctiforme [TaxId:272131] from a.25.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-01-25