SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Bifidobacterium animalis [TaxId: 442563]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2143708Fold c.93: Periplasmic binding protein-like I [53821] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    parallel beta-sheet of 6 strands, order 213456
  4. 2143709Superfamily c.93.1: Periplasmic binding protein-like I [53822] (2 families) (S)
    Similar in architecture to the superfamily II but partly differs in topology
  5. 2143989Family c.93.1.0: automated matches [191439] (1 protein)
    not a true family
  6. 2143990Protein automated matches [190646] (70 species)
    not a true protein
  7. 2285453Species Bifidobacterium animalis [TaxId:442563] [328754] (1 PDB entry)

PDB entry in Species: Bifidobacterium animalis [TaxId: 442563]:

More info for Species Bifidobacterium animalis [TaxId:442563] from c.93.1.0 automated matches

Timeline for Species Bifidobacterium animalis [TaxId:442563] from c.93.1.0 automated matches:

  • Species Bifidobacterium animalis [TaxId:442563] from c.93.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-01-19