SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Geobacillus stearothermophilus [TaxId: 272567]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2172288Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2172847Superfamily d.58.4: Dimeric alpha+beta barrel [54909] (24 families) (S)
    dimerizes through the beta-sheet; forms beta-sheet barrel, closed (n=8, S=12); dimers may assemble in higher oligomers
  5. 2173015Family d.58.4.10: Chlorite dismutase-like [110965] (2 protein domains)
    Pfam PF06778; duplication: consists of two similar domains; forms a pentamer similar to the MLI decamer
  6. 2173023Protein YwfI homologue [110966] (2 species)
  7. 2285390Species Geobacillus stearothermophilus [TaxId:272567] [328691] (1 PDB entry)

PDB entry in Species: Geobacillus stearothermophilus [TaxId: 272567]:

More info for Species Geobacillus stearothermophilus [TaxId:272567] from d.58.4.10 YwfI homologue

Timeline for Species Geobacillus stearothermophilus [TaxId:272567] from d.58.4.10 YwfI homologue:

  • Species Geobacillus stearothermophilus [TaxId:272567] from d.58.4.10 YwfI homologue appears in periodic updates to SCOPe 2.06 starting on 2017-01-19