Lineage for d5ldoa_ (5ldo A:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2523189Fold d.61: LigT-like [55143] (1 superfamily)
    duplication of beta-alpha-beta-alpha-beta motif: antiparallel beta sheet forms barrel (n=6, S=8) similar to the barrel of prokaryotic DNA topoisomerases I and III
  4. 2523190Superfamily d.61.1: LigT-like [55144] (5 families) (S)
  5. 2523252Family d.61.1.0: automated matches [191492] (1 protein)
    not a true family
  6. 2523253Protein automated matches [190796] (6 species)
    not a true protein
  7. 2523259Species Escherichia coli [TaxId:469008] [328566] (7 PDB entries)
  8. 2523274Domain d5ldoa_: 5ldo A: [328630]
    automated match to d4qakb_
    complexed with 3am

Details for d5ldoa_

PDB Entry: 5ldo (more details), 2.75 Å

PDB Description: crystal structure of e.coli ligt complexed with 3'-amp
PDB Compounds: (A:) RNA 2',3'-cyclic phosphodiesterase

SCOPe Domain Sequences for d5ldoa_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ldoa_ d.61.1.0 (A:) automated matches {Escherichia coli [TaxId: 469008]}
epqrlffaidlpaeireqiihwrakhfppeagrpvaadnlhltlaflgevsaekekalsl
lagrirqpgftltlddagqwlrsrvvwlgmrqpprgliqlanmlrsqaarsgcfqsnrpf
hphitllrdaseavtipppgfnwsyavteftlyassfargrtrytplkrwaltq

SCOPe Domain Coordinates for d5ldoa_:

Click to download the PDB-style file with coordinates for d5ldoa_.
(The format of our PDB-style files is described here.)

Timeline for d5ldoa_: