Lineage for Species: Escherichia coli [TaxId: 469008]

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2523189Fold d.61: LigT-like [55143] (1 superfamily)
    duplication of beta-alpha-beta-alpha-beta motif: antiparallel beta sheet forms barrel (n=6, S=8) similar to the barrel of prokaryotic DNA topoisomerases I and III
  4. 2523190Superfamily d.61.1: LigT-like [55144] (5 families) (S)
  5. 2523252Family d.61.1.0: automated matches [191492] (1 protein)
    not a true family
  6. 2523253Protein automated matches [190796] (6 species)
    not a true protein
  7. 2523259Species Escherichia coli [TaxId:469008] [328566] (7 PDB entries)

PDB entries in Species: Escherichia coli [TaxId: 469008]:

  1. Domain(s) for 5ldi:
    1. 2523266Domain d5ldia_: 5ldi A: [328571]
      automated match to d4qakb_
      complexed with cl
    2. 2523267Domain d5ldib_: 5ldi B: [328690]
      automated match to d4qakb_
      complexed with cl
    3. 2523268Domain d5ldic_: 5ldi C: [328591]
      automated match to d4qakb_
      complexed with cl
    4. 2523269Domain d5ldid_: 5ldi D: [328570]
      automated match to d4qakb_
      complexed with cl
  2. Domain(s) for 5ldj:
    1. 2523278Domain d5ldja_: 5ldj A: [328584]
      automated match to d4qakb_
      complexed with po4
    2. 2523279Domain d5ldjb_: 5ldj B: [328598]
      automated match to d4qakb_
      complexed with po4
    3. 2523280Domain d5ldjc_: 5ldj C: [328621]
      automated match to d4qakb_
      complexed with po4
    4. 2523281Domain d5ldjd_: 5ldj D: [328577]
      automated match to d4qakb_
      complexed with po4
  3. Domain(s) for 5ldk:
    1. 2523270Domain d5ldka_: 5ldk A: [328611]
      automated match to d4qakb_
      complexed with atp
    2. 2523271Domain d5ldkb_: 5ldk B: [328740]
      automated match to d4qakb_
      complexed with atp
  4. Domain(s) for 5ldm:
    1. 2523272Domain d5ldma_: 5ldm A: [328626]
      automated match to d4qakb_
      complexed with 2am, cl
    2. 2523273Domain d5ldmb_: 5ldm B: [328640]
      automated match to d4qakb_
      complexed with 2am, cl
  5. Domain(s) for 5ldo:
    1. 2523274Domain d5ldoa_: 5ldo A: [328630]
      automated match to d4qakb_
      complexed with 3am
    2. 2523275Domain d5ldob_: 5ldo B: [328625]
      automated match to d4qakb_
      complexed with 3am
    3. 2523276Domain d5ldoc_: 5ldo C: [328683]
      automated match to d4qakb_
      complexed with 3am
    4. 2523277Domain d5ldod_: 5ldo D: [328567]
      automated match to d4qakb_
      complexed with 3am
  6. Domain(s) for 5ldp:
    1. 2523264Domain d5ldpa_: 5ldp A: [328606]
      automated match to d4qakb_
      complexed with atp, cl, mg
    2. 2523265Domain d5ldpb_: 5ldp B: [328583]
      automated match to d4qakb_
      complexed with atp, cl, mg
  7. Domain(s) for 5ldq:
    1. 2523260Domain d5ldqa_: 5ldq A: [328569]
      automated match to d4qakb_
      complexed with 1pe, cl, nap, po4
    2. 2523261Domain d5ldqb_: 5ldq B: [328575]
      automated match to d4qakb_
      complexed with 1pe, cl, nap, po4
    3. 2523262Domain d5ldqc_: 5ldq C: [328582]
      automated match to d4qakb_
      complexed with 1pe, cl, nap, po4
    4. 2523263Domain d5ldqd_: 5ldq D: [328574]
      automated match to d4qakb_
      complexed with 1pe, cl, nap, po4

More info for Species Escherichia coli [TaxId:469008] from d.61.1.0 automated matches

Timeline for Species Escherichia coli [TaxId:469008] from d.61.1.0 automated matches: