Lineage for Species: Escherichia coli [TaxId: 469008]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2178385Fold d.61: LigT-like [55143] (1 superfamily)
    duplication of beta-alpha-beta-alpha-beta motif: antiparallel beta sheet forms barrel (n=6, S=8) similar to the barrel of prokaryotic DNA topoisomerases I and III
  4. 2178386Superfamily d.61.1: LigT-like [55144] (5 families) (S)
  5. 2178448Family d.61.1.0: automated matches [191492] (1 protein)
    not a true family
  6. 2178449Protein automated matches [190796] (5 species)
    not a true protein
  7. 2285265Species Escherichia coli [TaxId:469008] [328566] (7 PDB entries)

PDB entries in Species: Escherichia coli [TaxId: 469008]:

  1. Domain(s) for 5ldi:
    1. 2285269Domain d5ldid_: 5ldi D: [328570]
      automated match to d4qakb_
      complexed with cl
    2. 2285270Domain d5ldia_: 5ldi A: [328571]
      automated match to d4qakb_
      complexed with cl
    3. 2285290Domain d5ldic_: 5ldi C: [328591]
      automated match to d4qakb_
      complexed with cl
    4. 2285389Domain d5ldib_: 5ldi B: [328690]
      automated match to d4qakb_
      complexed with cl
  2. Domain(s) for 5ldj:
    1. 2285276Domain d5ldjd_: 5ldj D: [328577]
      automated match to d4qakb_
      complexed with po4
    2. 2285283Domain d5ldja_: 5ldj A: [328584]
      automated match to d4qakb_
      complexed with po4
    3. 2285297Domain d5ldjb_: 5ldj B: [328598]
      automated match to d4qakb_
      complexed with po4
    4. 2285320Domain d5ldjc_: 5ldj C: [328621]
      automated match to d4qakb_
      complexed with po4
  3. Domain(s) for 5ldk:
    1. 2285310Domain d5ldka_: 5ldk A: [328611]
      automated match to d4qakb_
      complexed with atp
    2. 2285439Domain d5ldkb_: 5ldk B: [328740]
      automated match to d4qakb_
      complexed with atp
  4. Domain(s) for 5ldm:
    1. 2285325Domain d5ldma_: 5ldm A: [328626]
      automated match to d4qakb_
      complexed with 2am, cl
    2. 2285339Domain d5ldmb_: 5ldm B: [328640]
      automated match to d4qakb_
      complexed with 2am, cl
  5. Domain(s) for 5ldo:
    1. 2285266Domain d5ldod_: 5ldo D: [328567]
      automated match to d4qakb_
      complexed with 3am
    2. 2285324Domain d5ldob_: 5ldo B: [328625]
      automated match to d4qakb_
      complexed with 3am
    3. 2285329Domain d5ldoa_: 5ldo A: [328630]
      automated match to d4qakb_
      complexed with 3am
    4. 2285382Domain d5ldoc_: 5ldo C: [328683]
      automated match to d4qakb_
      complexed with 3am
  6. Domain(s) for 5ldp:
    1. 2285282Domain d5ldpb_: 5ldp B: [328583]
      automated match to d4qakb_
      complexed with atp, cl, mg
    2. 2285305Domain d5ldpa_: 5ldp A: [328606]
      automated match to d4qakb_
      complexed with atp, cl, mg
  7. Domain(s) for 5ldq:
    1. 2285268Domain d5ldqa_: 5ldq A: [328569]
      automated match to d4qakb_
      complexed with 1pe, cl, nap, po4
    2. 2285273Domain d5ldqd_: 5ldq D: [328574]
      automated match to d4qakb_
      complexed with 1pe, cl, nap, po4
    3. 2285274Domain d5ldqb_: 5ldq B: [328575]
      automated match to d4qakb_
      complexed with 1pe, cl, nap, po4
    4. 2285281Domain d5ldqc_: 5ldq C: [328582]
      automated match to d4qakb_
      complexed with 1pe, cl, nap, po4

More info for Species Escherichia coli [TaxId:469008] from d.61.1.0 automated matches

Timeline for Species Escherichia coli [TaxId:469008] from d.61.1.0 automated matches:

  • Species Escherichia coli [TaxId:469008] from d.61.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-01-19