Lineage for d5b5ob_ (5b5o B:)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2183652Fold d.92: Zincin-like [55485] (2 superfamilies)
    contains mixed beta sheet with connection over free side of the sheet
  4. 2183653Superfamily d.92.1: Metalloproteases ("zincins"), catalytic domain [55486] (18 families) (S)
  5. 2184166Family d.92.1.11: Matrix metalloproteases, catalytic domain [55528] (14 protein domains)
  6. 2184167Protein Collagenase-3 (MMP-13) [55540] (2 species)
  7. 2184168Species Human (Homo sapiens) [TaxId:9606] [55541] (45 PDB entries)
  8. 2285243Domain d5b5ob_: 5b5o B: [328544]
    automated match to d1euba_
    complexed with ca, edo, na, wmm, zn

Details for d5b5ob_

PDB Entry: 5b5o (more details), 1.2 Å

PDB Description: crystal structure of the catalytic domain of mmp-13 complexed with n- phenyl-4-((4h-1,2,4-triazol-3-ylsulfanyl)methyl)-1,3-thiazol-2-amine
PDB Compounds: (B:) collagenase 3

SCOPe Domain Sequences for d5b5ob_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5b5ob_ d.92.1.11 (B:) Collagenase-3 (MMP-13) {Human (Homo sapiens) [TaxId: 9606]}
ynvfprtlkwskmnltyrivnytpdmthsevekafkkafkvwsdvtplnftrlhdgiadi
misfgikehgdfypfdgpsgllahafppgpnyggdahfdddetwtssskgynlflvaahe
fghslgldhskdpgalmfpiytytgkshfmlpdddvqgiqslygp

SCOPe Domain Coordinates for d5b5ob_:

Click to download the PDB-style file with coordinates for d5b5ob_.
(The format of our PDB-style files is described here.)

Timeline for d5b5ob_:

  • d5b5ob_ appears in periodic updates to SCOPe 2.06 starting on 2017-01-19