Lineage for d5h39b_ (5h39 B:)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2190102Fold d.117: Thymidylate synthase/dCMP hydroxymethylase [55830] (1 superfamily)
    contains large mixed beta-sheet
  4. 2190103Superfamily d.117.1: Thymidylate synthase/dCMP hydroxymethylase [55831] (2 families) (S)
    automatically mapped to Pfam PF00303
  5. 2190104Family d.117.1.1: Thymidylate synthase/dCMP hydroxymethylase [55832] (4 protein domains)
  6. 2190399Protein automated matches [190469] (14 species)
    not a true protein
  7. 2285170Species Human herpesvirus 8 [TaxId:37296] [328471] (3 PDB entries)
  8. 2285229Domain d5h39b_: 5h39 B: [328530]
    automated match to d1hvya_
    complexed with ump

Details for d5h39b_

PDB Entry: 5h39 (more details), 2 Å

PDB Description: structural analysis of kshv thymidylate synthase
PDB Compounds: (B:) orf70

SCOPe Domain Sequences for d5h39b_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5h39b_ d.117.1.1 (B:) automated matches {Human herpesvirus 8 [TaxId: 37296]}
pheelqylrqlreilcrgsdrldrtgigtlslfgmqaryslrdhfpllttkrvfwrgvvq
ellwflkgstdsrelsrtgvkiwdkngsreflagrglahrregdlgpvygfqwrhfgaay
vdadadytgqgfdqlsyivdliknnphdrriimcawnpadlslmalppchllcqfyvadg
elscqlyqrsgdmglgvpfniasyslltymlahvtglrpgefihtlgdahiykthieplr
lqltrtprpfprleilrsvssmeeftpddfrlvdycphptirm

SCOPe Domain Coordinates for d5h39b_:

Click to download the PDB-style file with coordinates for d5h39b_.
(The format of our PDB-style files is described here.)

Timeline for d5h39b_:

  • d5h39b_ appears in periodic updates to SCOPe 2.06 starting on 2017-01-19