Lineage for d5i5pa1 (5i5p A:25-342)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2144291Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 2144292Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 2145531Family c.94.1.0: automated matches [191309] (1 protein)
    not a true family
  6. 2145532Protein automated matches [190039] (137 species)
    not a true protein
  7. 2285225Species Uncultured marine [TaxId:56765] [328526] (2 PDB entries)
  8. 2285226Domain d5i5pa1: 5i5p A:25-342 [328527]
    Other proteins in same PDB: d5i5pa2, d5i5pb2
    automated match to d5im2a_
    complexed with br, peg, phb

Details for d5i5pa1

PDB Entry: 5i5p (more details), 1.6 Å

PDB Description: crystal structure of a marine metagenome trap solute binding protein specific for aromatic acid ligands (sorcerer ii global ocean sampling expedition, unidentified microbe, locus tag gos_1523157) in complex with co-purified 4-hydroxybenzoate
PDB Compounds: (A:) trap transporter solute binding protein

SCOPe Domain Sequences for d5i5pa1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5i5pa1 c.94.1.0 (A:25-342) automated matches {Uncultured marine [TaxId: 56765]}
evvlkfhsfppmpansnakfvkpwsekvlaesngeikveiypamqlggkppqlvdqvrdg
vvdivwtvagytpgrfphleafelpfmpasaeatsqalqeyvdtvaasdlkdykvlavfc
hapgkihtkekviksaadlngmkmrgptrvitkmleglgatpvgmpvpavagalskgvid
gmvvpweimpsfklheltkahttvsgsrglyttpflflmnkakyeslsdehkkvidnnag
lalaklagqlwdgfevparklaldaggtihslsggplaemkaageglekdwiksandrgl
dgamlvktakdliskydk

SCOPe Domain Coordinates for d5i5pa1:

Click to download the PDB-style file with coordinates for d5i5pa1.
(The format of our PDB-style files is described here.)

Timeline for d5i5pa1:

  • d5i5pa1 appears in periodic updates to SCOPe 2.06 starting on 2017-01-18

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d5i5pa2