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Lineage for d5trgf_ (5trg F:)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2201124Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 2201125Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 2201309Family d.153.1.4: Proteasome subunits [56251] (4 protein domains)
  6. 2203920Protein automated matches [190144] (11 species)
    not a true protein
  7. 2204923Species Mycobacterium tuberculosis [TaxId:1773] [187707] (14 PDB entries)
  8. 2285003Domain d5trgf_: 5trg F: [328304]
    automated match to d2fhh1_
    complexed with 7hj

Details for d5trgf_

PDB Entry: 5trg (more details), 2.8 Å

PDB Description: structure of mycobacterium tuberculosis proteasome in complex with n, c-capped dipeptide dplg-2
PDB Compounds: (F:) Proteasome subunit alpha

SCOPe Domain Sequences for d5trgf_:

Sequence, based on SEQRES records: (download)

>d5trgf_ d.153.1.4 (F:) automated matches {Mycobacterium tuberculosis [TaxId: 1773]}
meqamrerselarkgiaraksvvalayaggvlfvaenpsrslqkiselydrvgfaaagkf
nefdnlrrggiqfadtrgyaydrrdvtgrqlanvyaqtlgtifteqakpyevelcvaeva
hygetkrpelyritydgsiadephfvvmggttepianalkesyaenasltdalriavaal
ragsadtsggdqptlgvaslevavldanrprrafrritgsalqal

Sequence, based on observed residues (ATOM records): (download)

>d5trgf_ d.153.1.4 (F:) automated matches {Mycobacterium tuberculosis [TaxId: 1773]}
meqamrerselarkgiaraksvvalayaggvlfvaenpsrslqkiselydrvgfaaagkf
nefdnlrrggiqfadtrgyaydrrdvtgrqlanvyaqtlgtifteqakpyevelcvaeva
hygetkrpelyritydgsiadephfvvmggttepianalkesyaenasltdalriavaal
ragslgvaslevavldanrprrafrritgsalqal

SCOPe Domain Coordinates for d5trgf_:

Click to download the PDB-style file with coordinates for d5trgf_.
(The format of our PDB-style files is described here.)

Timeline for d5trgf_:

  • d5trgf_ appears in periodic updates to SCOPe 2.06 starting on 2017-01-12