Lineage for d5thof_ (5tho F:)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2201124Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 2201125Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 2201309Family d.153.1.4: Proteasome subunits [56251] (4 protein domains)
  6. 2203920Protein automated matches [190144] (11 species)
    not a true protein
  7. 2284857Species Mycobacterium tuberculosis [TaxId:419947] [328158] (1 PDB entry)
  8. 2284870Domain d5thof_: 5tho F: [328171]
    automated match to d2fhh1_
    complexed with 7c7

Details for d5thof_

PDB Entry: 5tho (more details), 3 Å

PDB Description: crystal structure of mycobacterium tuberculosis proteasome in complex with n,c-capped dipeptide inhibitor pks2205
PDB Compounds: (F:) Proteasome subunit alpha

SCOPe Domain Sequences for d5thof_:

Sequence, based on SEQRES records: (download)

>d5thof_ d.153.1.4 (F:) automated matches {Mycobacterium tuberculosis [TaxId: 419947]}
meqamrerselarkgiaraksvvalayaggvlfvaenpsrslqkiselydrvgfaaagkf
nefdnlrrggiqfadtrgyaydrrdvtgrqlanvyaqtlgtifteqakpyevelcvaeva
hygetkrpelyritydgsiadephfvvmggttepianalkesyaenasltdalriavaal
ragsadtsggdqptlgvaslevavldanrprrafrritgsalqallv

Sequence, based on observed residues (ATOM records): (download)

>d5thof_ d.153.1.4 (F:) automated matches {Mycobacterium tuberculosis [TaxId: 419947]}
meqamrerselarkgiaraksvvalayaggvlfvaenpsrslqkiselydrvgfaaagkf
nefdnlrrggiqfadtrgyaydrrdvtgrqlanvyaqtlgtifteqakpyevelcvaeva
hygetkrpelyritydgsiadephfvvmggttepianalkesyaenasltdalriavaal
ragslgvaslevavldanrprrafrritgsalqallv

SCOPe Domain Coordinates for d5thof_:

Click to download the PDB-style file with coordinates for d5thof_.
(The format of our PDB-style files is described here.)

Timeline for d5thof_:

  • d5thof_ appears in periodic updates to SCOPe 2.06 starting on 2017-01-12