SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5hfmd2 (5hfm D:538-538)

  1. Root: SCOPe 2.06
  2. 2245868Class l: Artifacts [310555] (1 fold)
  3. 2245869Fold l.1: Tags [310573] (1 superfamily)
  4. 2245870Superfamily l.1.1: Tags [310607] (1 family) (S)
  5. 2245871Family l.1.1.1: Tags [310682] (2 protein domains)
  6. 2251949Protein N-terminal Tags [310894] (1 species)
  7. 2251950Species Synthetic [311501] (10277 PDB entries)
  8. 2284730Domain d5hfmd2: 5hfm D:538-538 [328031]
    Other proteins in same PDB: d5hfma1, d5hfmb1, d5hfmc1, d5hfmd1, d5hfme1, d5hfmf1
    complexed with tam

Details for d5hfmd2

PDB Entry: 5hfm (more details), 2.3 Å

PDB Description: gp41-targeting hiv-1 fusion inhibitors with hook-like ile-asp-leu tail
PDB Compounds: (D:) Envelope glycoprotein gp160,gp41 CHR region

SCOPe Domain Sequences for d5hfmd2:

Sequence; same for both SEQRES and ATOM records: (download)

>d5hfmd2 l.1.1.1 (D:538-538) N-terminal Tags {Synthetic}

SCOPe Domain Coordinates for d5hfmd2:

Click to download the PDB-style file with coordinates for d5hfmd2.
(The format of our PDB-style files is described here.)

Timeline for d5hfmd2:

  • d5hfmd2 appears in periodic updates to SCOPe 2.06 starting on 2017-01-12