SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Mycobacterium tuberculosis [TaxId: 83332]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2195565Fold d.144: Protein kinase-like (PK-like) [56111] (1 superfamily)
    consists of two alpha+beta domains, C-terminal domain is mostly alpha helical
  4. 2195566Superfamily d.144.1: Protein kinase-like (PK-like) [56112] (8 families) (S)
    shares functional and structural similarities with the ATP-grasp fold and PIPK
  5. 2199100Family d.144.1.0: automated matches [191359] (1 protein)
    not a true family
  6. 2199101Protein automated matches [190417] (25 species)
    not a true protein
  7. 2284711Species Mycobacterium tuberculosis [TaxId:83332] [328012] (4 PDB entries)

PDB entries in Species: Mycobacterium tuberculosis [TaxId: 83332]:

  1. Domain(s) for 5m06:
    1. 2284716Domain d5m06a_: 5m06 A: [328017]
      automated match to d2fuma_
      complexed with adp, ca
    2. 2284814Domain d5m06b_: 5m06 B: [328115]
      automated match to d2fuma_
      complexed with adp, ca
  2. Domain(s) for 5m07:
    1. 2284740Domain d5m07b_: 5m07 B: [328041]
      automated match to d1o6ya_
      complexed with na; mutant
    2. 2284794Domain d5m07a_: 5m07 A: [328095]
      automated match to d1o6ya_
      complexed with na; mutant
  3. Domain(s) for 5m08:
    1. 2284712Domain d5m08a_: 5m08 A: [328013]
      automated match to d1o6ya_
      mutant
    2. 2284784Domain d5m08b_: 5m08 B: [328085]
      automated match to d1o6ya_
      mutant
  4. Domain(s) for 5m09:
    1. 2284748Domain d5m09b_: 5m09 B: [328049]
      automated match to d1o6ya_
      complexed with na; mutant
    2. 2284834Domain d5m09a_: 5m09 A: [328135]
      automated match to d1o6ya_
      complexed with na; mutant

More info for Species Mycobacterium tuberculosis [TaxId:83332] from d.144.1.0 automated matches

Timeline for Species Mycobacterium tuberculosis [TaxId:83332] from d.144.1.0 automated matches:

  • Species Mycobacterium tuberculosis [TaxId:83332] from d.144.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-01-12