SCOPe 2.06: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.06
Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
Fold d.333: UbiD C-terminal domain-like [143967] (1 superfamily)
alpha-beta(2)-alpha-beta-alpha-beta(2); 3 layers, a/b/a; mixed beta-sheet, order: 12354, strands 2,3 and 5 are parallel to each other
Superfamily d.333.1: UbiD C-terminal domain-like [143968] (2 families)
Family d.333.1.0: automated matches [328000] (1 protein)
not a true family
Protein automated matches [328001] (2 species)
not a true protein

Species:

Escherichia coli [TaxId:199310] [328006] (3 PDB entries)
1. Domains for 5m1b:
  1. Domain d5m1ba2: 5m1b A:326-491 [328157]
    Other proteins in same PDB: d5m1ba1, d5m1bb1, d5m1bc1
    automated match to d2idba2
  2. Domain d5m1bb2: 5m1b B:326-490 [328129]
    Other proteins in same PDB: d5m1ba1, d5m1bb1, d5m1bc1
    automated match to d2idba2
  3. Domain d5m1bc2: 5m1b C:326-491 [328026]
    Other proteins in same PDB: d5m1ba1, d5m1bb1, d5m1bc1
    automated match to d2idba2
2. Domains for 5m1c:
  1. Domain d5m1ca2: 5m1c A:326-491 [328082]
    Other proteins in same PDB: d5m1ca1, d5m1cb1, d5m1cc1
    automated match to d2idba2
    complexed with pg4
  2. Domain d5m1cb2: 5m1c B:326-490 [328118]
    Other proteins in same PDB: d5m1ca1, d5m1cb1, d5m1cc1
    automated match to d2idba2
    complexed with pg4
  3. Domain d5m1cc2: 5m1c C:326-491 [328007]
    Other proteins in same PDB: d5m1ca1, d5m1cb1, d5m1cc1
    automated match to d2idba2
    complexed with pg4
3. Domains for 5m1e:
  1. Domain d5m1ea2: 5m1e A:326-492 [328091]
    Other proteins in same PDB: d5m1ea1, d5m1eb1, d5m1ec1
    automated match to d2idba2
    complexed with 7d9, mn, na
  2. Domain d5m1eb2: 5m1e B:326-491 [328111]
    Other proteins in same PDB: d5m1ea1, d5m1eb1, d5m1ec1
    automated match to d2idba2
    complexed with 7d9, mn, na
  3. Domain d5m1ec2: 5m1e C:326-491 [328064]
    Other proteins in same PDB: d5m1ea1, d5m1eb1, d5m1ec1
    automated match to d2idba2
    complexed with 7d9, mn, na
Escherichia coli [TaxId:562] [328002] (1 PDB entry)
- Domains for 5m1d:
  1. Domain d5m1da2: 5m1d A:326-492 [328003]
    Other proteins in same PDB: d5m1da1, d5m1db1, d5m1dc1
    automated match to d2idba2
    complexed with 4lu, mn, na, so4
  2. Domain d5m1db2: 5m1d B:326-491 [328056]
    Other proteins in same PDB: d5m1da1, d5m1db1, d5m1dc1
    automated match to d2idba2
    complexed with 4lu, mn, na, so4
  3. Domain d5m1dc2: 5m1d C:326-491 [328044]
    Other proteins in same PDB: d5m1da1, d5m1db1, d5m1dc1
    automated match to d2idba2
    complexed with 4lu, mn, na, so4

More info for Protein automated matches from d.333.1.0: automated matches

Timeline for Protein automated matches from d.333.1.0: automated matches:

Protein automated matches from d.333.1.0: automated matches is new in SCOPe 2.06-stable
Protein automated matches from d.333.1.0: automated matches appears in SCOPe 2.07
Protein automated matches from d.333.1.0: automated matches appears in the current release, SCOPe 2.08