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Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2216573Fold d.333: UbiD C-terminal domain-like [143967] (1 superfamily)
    alpha-beta(2)-alpha-beta-alpha-beta(2); 3 layers, a/b/a; mixed beta-sheet, order: 12354, strands 2,3 and 5 are parallel to each other
  4. 2216574Superfamily d.333.1: UbiD C-terminal domain-like [143968] (2 families) (S)
  5. 2284699Family d.333.1.0: automated matches [328000] (1 protein)
    not a true family
  6. 2284700Protein automated matches [328001] (2 species)
    not a true protein

Species:

  1. 2284701Escherichia coli [TaxId:562] [328002] (1 PDB entry)
  2. 2284705Escherichia coli [TaxId:199310] [328006] (3 PDB entries)
    1. Domains for 5m1b:
      1. 2284725Domain d5m1bc2: 5m1b C:326-491 [328026]
        Other proteins in same PDB: d5m1ba1, d5m1bb1, d5m1bc1
        automated match to d2idba2
      2. 2284828Domain d5m1bb2: 5m1b B:326-490 [328129]
        Other proteins in same PDB: d5m1ba1, d5m1bb1, d5m1bc1
        automated match to d2idba2
      3. 2284856Domain d5m1ba2: 5m1b A:326-491 [328157]
        Other proteins in same PDB: d5m1ba1, d5m1bb1, d5m1bc1
        automated match to d2idba2
    2. Domains for 5m1c:
      1. 2284706Domain d5m1cc2: 5m1c C:326-491 [328007]
        Other proteins in same PDB: d5m1ca1, d5m1cb1, d5m1cc1
        automated match to d2idba2
        complexed with pg4
      2. 2284781Domain d5m1ca2: 5m1c A:326-491 [328082]
        Other proteins in same PDB: d5m1ca1, d5m1cb1, d5m1cc1
        automated match to d2idba2
        complexed with pg4
      3. 2284817Domain d5m1cb2: 5m1c B:326-490 [328118]
        Other proteins in same PDB: d5m1ca1, d5m1cb1, d5m1cc1
        automated match to d2idba2
        complexed with pg4
    3. Domains for 5m1e:
      1. 2284763Domain d5m1ec2: 5m1e C:326-491 [328064]
        Other proteins in same PDB: d5m1ea1, d5m1eb1, d5m1ec1
        automated match to d2idba2
        complexed with 7d9, mn, na
      2. 2284790Domain d5m1ea2: 5m1e A:326-492 [328091]
        Other proteins in same PDB: d5m1ea1, d5m1eb1, d5m1ec1
        automated match to d2idba2
        complexed with 7d9, mn, na
      3. 2284810Domain d5m1eb2: 5m1e B:326-491 [328111]
        Other proteins in same PDB: d5m1ea1, d5m1eb1, d5m1ec1
        automated match to d2idba2
        complexed with 7d9, mn, na

More info for Protein automated matches from d.333.1.0: automated matches

Timeline for Protein automated matches from d.333.1.0: automated matches:

  • Protein automated matches from d.333.1.0: automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-01-12