SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Staphylococcus aureus [TaxId: 367830]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2085156Superfamily c.1.10: Aldolase [51569] (9 families) (S)
    Common fold covers whole protein structure
  5. 2086456Family c.1.10.0: automated matches [191319] (1 protein)
    not a true family
  6. 2086457Protein automated matches [190115] (73 species)
    not a true protein
  7. 2284672Species Staphylococcus aureus [TaxId:367830] [327973] (2 PDB entries)

PDB entries in Species: Staphylococcus aureus [TaxId: 367830]:

  1. Domain(s) for 5kzd:
    1. 2284673Domain d5kzdd_: 5kzd D: [327974]
      automated match to d4ahob_
      complexed with rcj
    2. 2284675Domain d5kzdc_: 5kzd C: [327976]
      automated match to d4ahob_
      complexed with rcj
    3. 2284683Domain d5kzda_: 5kzd A: [327984]
      automated match to d4ahob_
      complexed with rcj
    4. 2284717Domain d5kzdb_: 5kzd B: [328018]
      automated match to d4ahob_
      complexed with rcj
  2. Domain(s) for 5kze:
    1. 2284684Domain d5kzeg_: 5kze G: [327985]
      automated match to d4ahob_
      complexed with gol, so4
    2. 2284685Domain d5kzeh_: 5kze H: [327986]
      automated match to d4ahob_
      complexed with gol, so4
    3. 2284689Domain d5kzed_: 5kze D: [327990]
      automated match to d4ahob_
      complexed with gol, so4
    4. 2284710Domain d5kzef_: 5kze F: [328011]
      automated match to d4ahob_
      complexed with gol, so4
    5. 2284720Domain d5kzee_: 5kze E: [328021]
      automated match to d4ahob_
      complexed with gol, so4
    6. 2284750Domain d5kzea_: 5kze A: [328051]
      automated match to d4ahob_
      complexed with gol, so4
    7. 2284753Domain d5kzec_: 5kze C: [328054]
      automated match to d4ahob_
      complexed with gol, so4
    8. 2284769Domain d5kzeb_: 5kze B: [328070]
      automated match to d4ahob_
      complexed with gol, so4

More info for Species Staphylococcus aureus [TaxId:367830] from c.1.10.0 automated matches

Timeline for Species Staphylococcus aureus [TaxId:367830] from c.1.10.0 automated matches:

  • Species Staphylococcus aureus [TaxId:367830] from c.1.10.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-01-12