SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Influenza a virus (strain a/hong kong/1/1968 h3n2) [TaxId: 506350]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2040266Fold b.19: Viral protein domain [49817] (1 superfamily)
    sandwich; 9 strands in 2 sheets; jelly-roll; form trimers
  4. 2040267Superfamily b.19.1: Viral protein domain [49818] (4 families) (S)
    forms homotrimers
  5. 2040896Family b.19.1.0: automated matches [227246] (1 protein)
    not a true family
  6. 2040897Protein automated matches [227017] (28 species)
    not a true protein
  7. 2284507Species Influenza a virus (strain a/hong kong/1/1968 h3n2) [TaxId:506350] [327808] (2 PDB entries)

PDB entries in Species: Influenza a virus (strain a/hong kong/1/1968 h3n2) [TaxId: 506350]:

  1. Domain(s) for 5t6n:
    1. 2284508Domain d5t6na1: 5t6n A:11-326 [327809]
      Other proteins in same PDB: d5t6na2, d5t6nb_, d5t6nc2, d5t6nd_, d5t6ne2, d5t6nf_
      automated match to d4xkga_
      complexed with 75u, bma, gol, man, nag, so4
    2. 2284550Domain d5t6nc1: 5t6n C:11-325 [327851]
      Other proteins in same PDB: d5t6na2, d5t6nb_, d5t6nc2, d5t6nd_, d5t6ne2, d5t6nf_
      automated match to d4xkga_
      complexed with 75u, bma, gol, man, nag, so4
    3. 2284555Domain d5t6ne1: 5t6n E:11-326 [327856]
      Other proteins in same PDB: d5t6na2, d5t6nb_, d5t6nc2, d5t6nd_, d5t6ne2, d5t6nf_
      automated match to d4xkga_
      complexed with 75u, bma, gol, man, nag, so4
  2. Domain(s) for 5thf:
    1. 2289410Domain d5thfe1: 5thf E:11-325 [332711]
      Other proteins in same PDB: d5thfa2, d5thfb_, d5thfc2, d5thfd1, d5thfd2, d5thfe2, d5thff_
      automated match to d4xkga_
      complexed with bma, nag
    2. 2289454Domain d5thfa1: 5thf A:11-325 [332755]
      Other proteins in same PDB: d5thfa2, d5thfb_, d5thfc2, d5thfd1, d5thfd2, d5thfe2, d5thff_
      automated match to d4xkga_
      complexed with bma, nag
    3. 2289483Domain d5thfc1: 5thf C:11-324 [332784]
      Other proteins in same PDB: d5thfa2, d5thfb_, d5thfc2, d5thfd1, d5thfd2, d5thfe2, d5thff_
      automated match to d4xkga_
      complexed with bma, nag

More info for Species Influenza a virus (strain a/hong kong/1/1968 h3n2) [TaxId:506350] from b.19.1.0 automated matches

Timeline for Species Influenza a virus (strain a/hong kong/1/1968 h3n2) [TaxId:506350] from b.19.1.0 automated matches:

  • Species Influenza a virus (strain a/hong kong/1/1968 h3n2) [TaxId:506350] from b.19.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-01-04