Lineage for d5m5bb_ (5m5b B:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2129295Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest
  4. 2129296Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (60 families) (S)
  5. 2129933Family c.66.1.25: mRNA cap methylase [88785] (3 protein domains)
  6. 2129978Protein automated matches [190302] (8 species)
    not a true protein
  7. 2279510Species Zika virus [TaxId:64320] [322811] (2 PDB entries)
  8. 2284363Domain d5m5bb_: 5m5b B: [327664]
    automated match to d2px8b_
    complexed with cl, gol, sam, so4

Details for d5m5bb_

PDB Entry: 5m5b (more details), 2.01 Å

PDB Description: crystal structure of zika virus ns5 methyltransferase
PDB Compounds: (B:) NS5 methyltransferase

SCOPe Domain Sequences for d5m5bb_:

Sequence, based on SEQRES records: (download)

>d5m5bb_ c.66.1.25 (B:) automated matches {Zika virus [TaxId: 64320]}
etlgekwkarlnqmsalefysykksgitevcreearralkdgvatgghavsrgsaklrwl
vergylqpygkvidlgcgrggwsyyaatirkvqevkgytkggpgheepmlvqsygwnivr
lksgvdvfhmaaepcdtllcdigesssspeveeartlrvlsmvgdwlekrpgafcikvlc
pytstmmetlerlqrryggglvrvplsrnsthemywvsgaksntiksvsttsqlllgrmd
gprrpvkyeedvnlgsgtrav

Sequence, based on observed residues (ATOM records): (download)

>d5m5bb_ c.66.1.25 (B:) automated matches {Zika virus [TaxId: 64320]}
etlgekwkarlnqmsalefysykksgitevchavsrgsaklrwlvergylqpygkvidlg
cgrggwsyyaatirkvqevkgytkggpgheepmlvqsygwnivrlksgvdvfhmaaepcd
tllcdigesssspeveeartlrvlsmvgdwlekrpgafcikvlcpytstmmetlerlqrr
yggglvrvplsrnsthemywvsgaksntiksvsttsqlllgrmdgprrpvkyeedvnlgs
gtrav

SCOPe Domain Coordinates for d5m5bb_:

Click to download the PDB-style file with coordinates for d5m5bb_.
(The format of our PDB-style files is described here.)

Timeline for d5m5bb_:

  • d5m5bb_ appears in periodic updates to SCOPe 2.06 starting on 2016-12-29