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Lineage for d5jymc1 (5jym C:1-101)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2030835Superfamily b.1.6: Cadherin-like [49313] (3 families) (S)
  5. 2030925Family b.1.6.0: automated matches [191376] (1 protein)
    not a true family
  6. 2030926Protein automated matches [190458] (4 species)
    not a true protein
  7. 2030941Species Human (Homo sapiens) [TaxId:9606] [255601] (16 PDB entries)
  8. 2284321Domain d5jymc1: 5jym C:1-101 [327622]
    Other proteins in same PDB: d5jymb1, d5jymb2, d5jymd1, d5jymd2
    automated match to d4oy9a1
    complexed with ca

Details for d5jymc1

PDB Entry: 5jym (more details), 2.45 Å

PDB Description: human p-cadherin ec12 with scfv tsp11 bound
PDB Compounds: (C:) Cadherin-3

SCOPe Domain Sequences for d5jymc1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5jymc1 b.1.6.0 (C:1-101) automated matches {Human (Homo sapiens) [TaxId: 9606]}
dwvvapisvpengkgpfpqrlnqlksnkdrdtkifysitgpgadsppegvfaveketgwl
llnkpldreeiakyelfghavsengasvedpmnisiivtdq

SCOPe Domain Coordinates for d5jymc1:

Click to download the PDB-style file with coordinates for d5jymc1.
(The format of our PDB-style files is described here.)

Timeline for d5jymc1:

  • d5jymc1 appears in periodic updates to SCOPe 2.06 starting on 2016-12-28