SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5fh1a2 (5fh1 A:260-622)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2143071Fold c.91: PEP carboxykinase-like [53794] (1 superfamily)
    contains a P-loop NTP-binding motif; mixed beta-sheet folds into a barrel-like structure with helices packed on one side
  4. 2143072Superfamily c.91.1: PEP carboxykinase-like [53795] (3 families) (S)
  5. 2143073Family c.91.1.1: PEP carboxykinase C-terminal domain [53796] (3 protein domains)
  6. 2143074Protein Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) [69612] (2 species)
  7. 2143084Species Norway rat (Rattus norvegicus) [TaxId:10116] [225316] (35 PDB entries)
  8. 2284313Domain d5fh1a2: 5fh1 A:260-622 [327614]
    Other proteins in same PDB: d5fh1a1
    automated match to d3dtba2
    complexed with epe, gtp, mn, na

Details for d5fh1a2

PDB Entry: 5fh1 (more details), 1.55 Å

PDB Description: the structure of rat cytosolic pepck variant e89d in complex with gtp
PDB Compounds: (A:) Phosphoenolpyruvate carboxykinase, cytosolic [GTP]

SCOPe Domain Sequences for d5fh1a2:

Sequence, based on SEQRES records: (download)

>d5fh1a2 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Norway rat (Rattus norvegicus) [TaxId: 10116]}
wlaehmlilgitnpegkkkylaaafpsacgktnlammnptlpgwkvecvgddiawmkfda
qgnlrainpengffgvapgtsvktnpnaiktiqkntiftnvaetsdggvywegideplap
gvtitswknkewrpqdeepcahpnsrfctpasqcpiidpawespegvpiegiifggrrpa
gvplvyealswqhgvfvgaamrseataaaehkgkvimhdpfamrpffgynfgkylahwls
mahrpaaklpkifhvnwfrkdkngkflwpgfgensrvlewmfgriegedsakltpigyvp
kedalnlkglgdvnveelfgiskefwekeveeidkyledqvnadlpyeierelralkqri
sqm

Sequence, based on observed residues (ATOM records): (download)

>d5fh1a2 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Norway rat (Rattus norvegicus) [TaxId: 10116]}
wlaehmlilgitnpegkkkylaaafpsacgktnlammnptlpgwkvecvgddiawmkfda
qgnlrainpengffgvapgtsvktnpnaiktiqkntiftnvaetsdggvywegideplap
gvtitswknkewrpqdeepcahpnsrfctpasqcpiidpawespegvpiegiifggrrpa
gvplvyealswqhgvfvgaamrseatgkvimhdpfamrpffgynfgkylahwlsmahrpa
aklpkifhvnwfrkdkngkflwpgfgensrvlewmfgriegedsakltpigyvpkedaln
lkglgdvnveelfgiskefwekeveeidkyledqvnadlpyeierelralkqrisqm

SCOPe Domain Coordinates for d5fh1a2:

Click to download the PDB-style file with coordinates for d5fh1a2.
(The format of our PDB-style files is described here.)

Timeline for d5fh1a2:

  • d5fh1a2 appears in periodic updates to SCOPe 2.06 starting on 2016-12-28

View in 3D
Domains from same chain:
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d5fh1a1