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Lineage for d5gznb1 (5gzn B:1-303)

  1. Root: SCOPe 2.06
  2. 2223823Class f: Membrane and cell surface proteins and peptides [56835] (59 folds)
  3. 2225037Fold f.10: Viral glycoprotein, central and dimerisation domains [56982] (1 superfamily)
    2 intertwined domains; all-beta and alpha+beta
  4. 2225038Superfamily f.10.1: Viral glycoprotein, central and dimerisation domains [56983] (2 families) (S)
  5. 2225083Family f.10.1.0: automated matches [227258] (1 protein)
    not a true family
  6. 2225084Protein automated matches [227047] (6 species)
    not a true protein
  7. 2273977Species Zika virus [TaxId:64320] [317278] (5 PDB entries)
  8. 2284299Domain d5gznb1: 5gzn B:1-303 [327600]
    Other proteins in same PDB: d5gzna2, d5gznb2, d5gznd1, d5gznd2, d5gznl1, d5gznl2
    automated match to d4gsxa1

Details for d5gznb1

PDB Entry: 5gzn (more details), 3 Å

PDB Description: structure of neutralizing antibody bound to zika envelope protein
PDB Compounds: (B:) Genome polyprotein

SCOPe Domain Sequences for d5gznb1:

Sequence, based on SEQRES records: (download)

>d5gznb1 f.10.1.0 (B:1-303) automated matches {Zika virus [TaxId: 64320]}
ircigvsnrdfvegmsggtwvdvvlehggcvtvmaqdkptvdielvtttvsnmaevrsyc
yeasisdmasdsrcptqgeayldkqsdtqyvckrtlvdrgwgngcglfgkgslvtcakfa
cskkmtgksiqpenleyrimlsvhgsqhsgmivndtghetdenrakveitpnspraeatl
ggfgslgldceprtgldfsdlyyltmnnkhwlvhkewfhdiplpwhagadtgtphwnnke
alvefkdahakrqtvvvlgsqegavhtalagaleaemdgakgrlssghlkcrlkmdklrl
kgv

Sequence, based on observed residues (ATOM records): (download)

>d5gznb1 f.10.1.0 (B:1-303) automated matches {Zika virus [TaxId: 64320]}
ircigvsnrdfvegmsggtwvdvvlehggcvtvmaqdkptvdielvtttvsnmaevrsyc
yeasisdmasdsrcptqgeayldkqsdtqyvckrtlvdrgwgngcglfgkgslvtcakfa
cskkmtgksiqpenleyrimlsvhgsqndtghetdenrakveitpnspraeatlggfgsl
gldceprtgldfsdlyyltmnnkhwlvhkewfhdiplpwhagadtgtphwnnkealvefk
dahakrqtvvvlgsqegavhtalagaleaemdgakgrlssghlkcrlkmdklrlkgv

SCOPe Domain Coordinates for d5gznb1:

Click to download the PDB-style file with coordinates for d5gznb1.
(The format of our PDB-style files is described here.)

Timeline for d5gznb1:

  • d5gznb1 appears in periodic updates to SCOPe 2.06 starting on 2016-12-28