SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Streptomyces ambofaciens [TaxId: 278992]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2099098Fold c.14: ClpP/crotonase [52095] (1 superfamily)
    core: 4 turns of (beta-beta-alpha)n superhelix
  4. 2099099Superfamily c.14.1: ClpP/crotonase [52096] (5 families) (S)
  5. 2100042Family c.14.1.0: automated matches [191346] (1 protein)
    not a true family
  6. 2100043Protein automated matches [190246] (53 species)
    not a true protein
  7. 2284282Species Streptomyces ambofaciens [TaxId:278992] [327583] (3 PDB entries)

PDB entries in Species: Streptomyces ambofaciens [TaxId: 278992]:

  1. Domain(s) for 5inf:
    1. 2284293Domain d5inff1: 5inf F:16-263 [327594]
      automated match to d3iava1
      complexed with hxc
    2. 2284294Domain d5inff2: 5inf F:264-532 [327595]
      automated match to d3iava2
      complexed with hxc
    3. 2284301Domain d5infd1: 5inf D:15-263 [327602]
      automated match to d3iava1
      complexed with hxc
    4. 2284302Domain d5infd2: 5inf D:264-532 [327603]
      automated match to d3iava2
      complexed with hxc
    5. 2284339Domain d5infc1: 5inf C:14-263 [327640]
      automated match to d3iava1
      complexed with hxc
    6. 2284340Domain d5infc2: 5inf C:264-532 [327641]
      automated match to d3iava2
      complexed with hxc
    7. 2284364Domain d5infe1: 5inf E:16-263 [327665]
      automated match to d3iava1
      complexed with hxc
    8. 2284365Domain d5infe2: 5inf E:264-532 [327666]
      automated match to d3iava2
      complexed with hxc
    9. 2284369Domain d5infa1: 5inf A:15-263 [327670]
      automated match to d3iava1
      complexed with hxc
    10. 2284370Domain d5infa2: 5inf A:264-532 [327671]
      automated match to d3iava2
      complexed with hxc
    11. 2284425Domain d5infb1: 5inf B:15-263 [327726]
      automated match to d3iava1
      complexed with hxc
    12. 2284426Domain d5infb2: 5inf B:264-532 [327727]
      automated match to d3iava2
      complexed with hxc
  2. Domain(s) for 5ing:
    1. 2284295Domain d5ingb1: 5ing B:14-263 [327596]
      automated match to d3iava1
    2. 2284296Domain d5ingb2: 5ing B:264-532 [327597]
      automated match to d3iava2
    3. 2284366Domain d5ingf1: 5ing F:15-263 [327667]
      automated match to d3iava1
    4. 2284367Domain d5ingf2: 5ing F:264-532 [327668]
      automated match to d3iava2
    5. 2284415Domain d5inge1: 5ing E:14-263 [327716]
      automated match to d3iava1
    6. 2284416Domain d5inge2: 5ing E:264-532 [327717]
      automated match to d3iava2
    7. 2284431Domain d5ingc1: 5ing C:14-263 [327732]
      automated match to d3iava1
    8. 2284432Domain d5ingc2: 5ing C:264-532 [327733]
      automated match to d3iava2
    9. 2284433Domain d5inga1: 5ing A:12-263 [327734]
      automated match to d3iava1
    10. 2284434Domain d5inga2: 5ing A:264-532 [327735]
      automated match to d3iava2
    11. 2284437Domain d5ingd1: 5ing D:16-263 [327738]
      automated match to d3iava1
    12. 2284438Domain d5ingd2: 5ing D:264-532 [327739]
      automated match to d3iava2
  3. Domain(s) for 5ini:
    1. 2284283Domain d5inic1: 5ini C:16-263 [327584]
      automated match to d3iava1
      complexed with hxc
    2. 2284284Domain d5inic2: 5ini C:264-532 [327585]
      automated match to d3iava2
      complexed with hxc
    3. 2284290Domain d5inid1: 5ini D:16-263 [327591]
      automated match to d3iava1
      complexed with hxc
    4. 2284291Domain d5inid2: 5ini D:264-532 [327592]
      automated match to d3iava2
      complexed with hxc
    5. 2284361Domain d5inib1: 5ini B:14-263 [327662]
      automated match to d3iava1
      complexed with hxc
    6. 2284362Domain d5inib2: 5ini B:264-532 [327663]
      automated match to d3iava2
      complexed with hxc
    7. 2284374Domain d5inia1: 5ini A:15-263 [327675]
      automated match to d3iava1
      complexed with hxc
    8. 2284375Domain d5inia2: 5ini A:264-532 [327676]
      automated match to d3iava2
      complexed with hxc
    9. 2284385Domain d5inie1: 5ini E:16-263 [327686]
      automated match to d3iava1
      complexed with hxc
    10. 2284386Domain d5inie2: 5ini E:264-532 [327687]
      automated match to d3iava2
      complexed with hxc
    11. 2284435Domain d5inif1: 5ini F:16-263 [327736]
      automated match to d3iava1
      complexed with hxc
    12. 2284436Domain d5inif2: 5ini F:264-532 [327737]
      automated match to d3iava2
      complexed with hxc

More info for Species Streptomyces ambofaciens [TaxId:278992] from c.14.1.0 automated matches

Timeline for Species Streptomyces ambofaciens [TaxId:278992] from c.14.1.0 automated matches:

  • Species Streptomyces ambofaciens [TaxId:278992] from c.14.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2016-12-28